Oncorhynchus masou masou (cherry salmon): 135524148
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Entry
135524148 CDS
T10723
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135524148
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135524148
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
ATG17_like
Motif
Other DBs
NCBI-GeneID:
135524148
NCBI-ProteinID:
XP_064807439
LinkDB
All DBs
Position
31:complement(55696227..55742428)
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AA seq
1789 aa
AA seq
DB search
MFIFQIATMLSAGSCVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLHRP
EPFCIVSHLQDEKKCFLCDSTDVYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICEPCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISLH
PGSRYMVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGS
VGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRDFIFSVSALLHRGAKACQCDPQGA
LSTVCAASGGQCQCRPNVVGRNCDKCAPATFLFGPSGCRPCDCNPQGSEDAFCHEATGQC
VCIPGAYSRQCDRCLPGHWGFPNCRLCTCNGHTEQCDPDSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPGSGRQFAGECYLGLDSPYQVFCVCSPGYRGARCEECA
PGYYGNPHENSGKCQPCQCNNNIDMLDQESCNVRTGECLKCLYHTEGQGCHGCKLGYYGD
ALTQNCRKCVCNHLGTNPATCSVVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNDLSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDPRG
IAEQQCHKANGRCVCVEGVSGPRCDVCTRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNVEQSAVAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLMDQVEFIKNTDIRGAT
DSVTKYYQQSLAADARANTSTSGPGNPVESSAILRQATEDKMNNTREEFHRRQEEHAKRL
DDLAGQLETLDLSELSVKTCGSPADASCVDSPCGGLSCVDFEGNRRCGGEGCGGLVTLAN
NAWQKAKDFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDKSNE
ELRSLIRQIRDFLTQDAADLESIEAVANQVLAMQMPTTPAQLQTLTDEIRERVGDLAHVE
TILNQSSDEIQRAESLLEQARRVSKEATNVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETVDSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDTES
INKVAEQVKKDLDSELKDKYSTVEDLITQKAGGVANAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQDISHKVTVYSTCLF
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtttatatttcaaattgcgaccatgctatccgcagggtcgtgcgtccttgcccaggta
ggcatacccgagttcagcgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccagctctcctccaactccacatgtggcctccaccggccc
gagccgttctgcatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgacgtctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcttgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgatcgagcgctcggctgactttgggaagaac
tggcaggtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagatccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgctgtctatgacatggtggtccggggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtgcatggccac
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagccaagggacgcaacaccaatgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggtgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgcgaccccagcatctgtgaacca
tgtaactgtgatccggtgggctccctgaacggcgggatctgtgacaggatgactgatgtg
tcatctggactgatcactggccagtgtcgctgcaaacccaatgtggagggagagcgctgt
gaccagtgccagcaggcccactatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtcatacggactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccaatgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctc
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggtcgg
cgctgtgaccaggtggagtcaggcttctatttcattgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggactgggataggttttgtcaacgttcctgagggggcctacctggag
ttctccattgacaacatcccccactccatggagtacgacgtcctcatccgctatgagcct
cagttaccagaccagtgggaggaggtgttgatgacagtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaccatgcccgatgacgacaaccagatgatatcccttcat
cccggatcacgatacatggtgctccccagaccagtgtgtttcgaggcagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgtccagtccccatataca
cttatcgactcgattgtgctgatgccgcactgtaagaacctggagatcttcactggttct
gtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccgtccacagacatctgccgtgacttcatcttc
agcgtatctgctctgctgcaccggggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacagtgtgtgccgccagcggtgggcagtgccagtgtcgccccaacgtggtaggc
aggaactgtgacaagtgtgcccctgccaccttcctgtttggacccagtggctgcagaccc
tgtgattgcaatccccagggatcggaggatgcgttctgccatgaggctacaggccagtgt
gtgtgtatccccggggcatacagccgtcagtgtgaccgctgtctgccgggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggtcacacagagcagtgtgaccccgactcc
ggaaaatgcctgggctgccgagaacagaccactggacacaactgcgagaggtgtctggat
ggttactacggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggccgggaagcgggcgacagtttgccggtgaatgttacctcggtctggactcccct
taccaggtgttctgtgtctgcagccccgggtacagaggtgccagatgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacagcgggaagtgccaaccctgccagtgcaac
aacaacattgacatgctggatcaggagtcctgtaatgtcagaacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgccacggctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggcaccaatccagccacg
tgctcggtggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagcgag
acgggctgcgacgcctgcgactgtgaccccaaccactcatttgggacttcctgcaatgat
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaacgcatgtgactgcgacccgcgaggc
atcgccgagcagcagtgccacaaggccaatggtcgctgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacgtctgcacgcgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgctttgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggccagcggcatcaccggaccctataaacac
accatagataacgtggagcagagcgccgtggccataagaactatcctggcccagaacccg
gctacacagccgctgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaattggactcactcaaagaggacacccagaagctggatcgcacc
gtcaaggatctgatggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcaccaagtactaccagcagtctctggctgcagatgctcgcgccaacacctcc
actagtggcccaggcaaccctgtggagagctctgccattttacggcaagccacagaggac
aagatgaacaacaccagggaggagttccacaggaggcaggaagaacacgccaagagactg
gatgacctggcaggacaactggagacactggacctatcagaactcagtgtgaagacgtgt
ggcagcccagctgatgcgtcgtgtgtggactctccgtgcggggggttgagctgtgtggac
ttcgaggggaacaggaggtgcggtggcgaagggtgcggcggtctggtcaccctggccaat
aacgcctggcagaaggccaaggactttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgctgaagaccaacggtaccaagcagcgtgtggacaagagcaacgag
gagctgcgcagcctcatccgacagatcagagacttcctcacacaggatgcagcagacctg
gagagcattgaggcagtggccaaccaggtgctggccatgcagatgcccaccacaccagcc
cagctccaaaccctgacagacgagatcagggagagagtaggagacctagcccacgtggag
accatccttaaccagagctctgacgaaatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacaaacgtgagggacacagcagagatggtgaagcaggtt
ctggaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccact
gacatcaaaggcaccaatgatctcctgacctcagtggagtcggagacagtggactcggag
tacaagctgaacaacgccacccagaggctgctgcggttagagcgcgacgtcacgctgctc
agagagaagacactgaacacctcactcagctctgaacaaactgaaaaagacacagagagc
atcaacaaagtggctgagcaggtcaaaaaggacctggactcggagctgaaggataagtac
agcactgtggaggacctgatcacacagaaggctgggggcgtggccaatgccaagaagagg
gcggagcttctacagcaggaagcaaaagacctgctgcttcaggccagcgacaagctgcag
ctgctgaaagatttagagaagtcgtatgaggacaaccagaagactttggaagacaaggcc
aaccagttggtggatctggagaagtccatcaaagagcttctgcaggacatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa
DBGET
integrated database retrieval system
