Oncorhynchus masou masou (cherry salmon): 135524169
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Entry
135524169 CDS
T10723
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135524169
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135524169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
135524169
NCBI-ProteinID:
XP_064807510
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All DBs
Position
31:57626373..57646708
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AA seq
668 aa
AA seq
DB search
MIMHGPMSQGSVHNSWKLKIPFLCFRGATLVLEVRRGHNLAGDLGVLPPEFLGAIANGWK
EIPEAGMNICDCLMADQRMDITSTMNEFMSPSSSDLISSSINTPGMDYTRKRKGSTSDYQ
IDGFSFEECGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLTV
LRMAVQHMKTLRGAANPYTEANYKPSFLTDDELKHLILRAADGFLFVVGCDRGKILFVSE
SVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITP
GPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPT
KMGLDDDNEPDNECCNLSCLVAIGRLHPHIVPQPSQEDIRVKPTDYVSRHAIDGKFVFVD
QRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFI
TLRSRWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADSSYPQSAVSPTASMDGVLTSEGGG
RRALQTVPGIPGGTRAGAGKIGRMIAEEVMENQRTRGSTPSSRGSSPLNISTPPDCSPGD
KRIQNGTLPGGPYSNQSIMSDNLHLSIDDPGSSSPSNDEAAMAVIMSLLEADAGLGGPVD
FSDLPWPL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgataatgcacggccccatgtcgcaaggatctgtacacaattcctggaagctaaaaatc
ccgttcttgtgtttcaggggtgcaactttggttttagaagttcggaggggtcataacctg
gcgggggatctgggggtccttcctccagaatttttgggagcaattgcaaatggatggaag
gaaattccagaagctggaatgaacatttgtgattgtctaatggcagaccaaagaatggac
attacctctacaatgaatgagttcatgtcccccagctccagcgacctgatcagcagctcc
atcaacaccccaggcatggactacacccgcaagagaaagggcagcacctccgactaccaa
attgatggattttcttttgaggagtgtggtgatcaccagggccggataaaaaatgccagg
gaggcacacagtcagattgagaagcggcgcagggacaagatgaacagcttcatagacgag
ctggctgcactagtcccgacctgcaacgctatgtcccgcaagctggacaaactcacggtc
ctacgcatggctgtccagcatatgaagacattaagaggagcagcaaacccttacacagag
gcgaattacaagccgtctttcctgacggatgatgaactgaagcacttaatattgagggct
gctgacggctttctgtttgttgttggatgtgatcgtgggaagatcctttttgtctcggag
tcagtttacaagatcctcaactattcccagaatgacctaattggccagagtctgtttgat
tacctgcatcctaaagacattgccaaagtcaaggagcaactgtcgtcatcggatacagca
cctcgggagcggctcattgatgccaaaaccggtctaccagttaagacagacatcacccct
gggccatctcgactgtgctccggggccagacgctcgttcttctgccgaatgaagtgtaac
cggccctacgtcaaaacagaggacaaggacttcccctccacctgctccaaaaagaaagcc
gaccgcaagagcttctgcacgatccacagtactggctacctgaagagttggccgcccacc
aagatgggcctggacgatgacaacgagcccgacaatgagtgctgtaacctcagctgcctg
gtggccatcggccggctgcatccccacatcgtcccccagccctcccaagaggacatccgc
gtcaaacccaccgactatgtctcccgccacgccatcgatgggaagtttgtctttgttgac
cagagggccacagccattcttgcatacttaccccaggagcttcttggcacctctttctac
gagtatttccatcaggatgatattggccacctggcagaatgtcacagacaagtgcttcag
atgagagaaaagatcaacacaaactgttataagttcaagattaaagatggctccttcatc
actctgcgaagtcgctggttcagtttcatgaatccttggaccaaagaggtggagtacatc
gtctccacaaacacagtggtctcgtgcagtatgctggatggtgcagactccagctatcct
cagtctgccgtctctcccactgcctctatggacggtgtgctgacgtcagaaggtggaggg
agacgggcccttcagacggtgccaggcatccctgggggaacacgtgcaggtgccggtaag
atcggtcgcatgatcgcagaggaggtgatggagaatcagaggacccgaggctcgaccccc
tccagccgtggctccagccccctgaacatcagcacccctccagactgttctccaggggac
aagagaattcaaaatgggacgttaccaggaggaccatactccaaccagtctattatgagt
gacaacttgcacctcagcattgacgacccaggctccagcagccccagtaatgacgaggca
gccatggctgtgattatgagtctcctggaggctgatgcaggcctcggtggccctgtagac
ttcagtgacttaccctggcccttgtga
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