Oncorhynchus masou masou (cherry salmon): 135524233
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Entry
135524233 CDS
T10723
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135524233
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135524233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
LMBR1
Fez1
Phage_H_T_join_2
FlaF
WHEP-TRS
Spc29
Motif
Other DBs
NCBI-GeneID:
135524233
NCBI-ProteinID:
XP_064807660
LinkDB
All DBs
Position
31:complement(61457773..61533975)
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AA seq
1005 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKSMDYSNSLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATTDSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLEMCLDEHREKLNATEEMLQQELLCRTTLETQKLDLMAEVS
NLKLKLNSFEKDILHFDFRDSEDIGLEINELRYKVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRNEHKLQALKEELVTLRRQLEGRDREVRRLHGETGFRANTPGGMDC
GERVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLQRYKKVQDMV
MSVQEKKDKTKDGESDESHSDNSLSVMSMTTTPVALESERHALAGVEEVAAKSPDELETH
YGATEGPSATTHPSVQSACAQSVPELNQVEPERSLHVPKSASQENLYVSNSEKITLVIDE
KPTENKAAEDIGKISERPPKSPSSSRPEDDSFGTKKARSSFGRGFFKIKGGKRTASTPNL
AETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPEGKKKSRGIKALFGKLRRSQS
TTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNTDLDTPFARWSKEQVCDWLQE
QGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHPLHKKKLQLALQALGSEEDDNKGK
LDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQV
LRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLM
VLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDYLENPDYTLLTATA
KVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSFQKGYELYEDDLDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacagcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcactgcatctgctggaggacctccggggcgtgctggag
ctgatggacacagaggagagggagggccttcgctgccagatccctgatgccaccacagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gaaatgtgtctggatgaacaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgactctagagactcagaaactggacctaatggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcagggac
agtgaggacattggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgagaagaaactgaaatctactaagtcgctaatggccaagctttct
agcctgaaaatcaaagtgggacagatgcagtatgagaaacagaggaacgagcacaaactg
caggcactgaaggaggagctggtgacgctgaggaggcagctggagggaagagacagagag
gtgaggaggttacacggcgagactgggttcagagcaaacaccccgggtggcatggactgt
ggagagagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagctaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgcagcgctacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtcacagc
gacaactccctctctgtgatgtcaatgacgaccaccccggttgccctggagtcggagagg
cacgcgctagctggagtcgaggaagtagcagcaaagagcccagacgagctggagacgcac
tatggggctactgaagggccttcggcaacaacccacccttcagtccagtcagcctgcgct
cagagcgtgccagagcttaaccaagttgaacctgagaggtccctgcatgtcccaaagtca
gcgagtcaggaaaacttgtatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggctgcggaggacatcggtaagatcagcgagcgcccgcccaag
tctccctcttcatctcgcccagaggacgacagcttcggtaccaagaaggctcgctcctcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcacccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagcgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacgttcaacctggatgacaacctatcagagccggtcgagttcaagaggggcggagtc
cgggccacagcaggacccagactgggatggtcccgggacctacagcaatcacccaacact
gacctggacaccccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggag
cagggactggggctctacctgaacatggcccacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaggatctagagagggagctgggcatcaaacacccgctgcacaag
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccaggtggctggatgacattggcctgcctcagtataagacc
cagttcgatgaagggagggtggacggccgcatgctgcactatatgacagtagatgacctg
ttgtctctgaaggtgggcagtgtgctccaccacctcagcatcaaaagagccatccaggtg
ctacgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaat
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggtgtgcacgggggactcatg
gtgctggagcctcggttcaatgtggagaccatggccctgctgctgaacattccccccaac
aagaccctgctgcgtaggcacctggccacccacttcaacctgctggtgggttctgaggcc
caggggctcaaacaggattatctagagaaccccgactacaccctgcttacagccaccgcc
aaggtcaagctgaggaagatgacgtttgggagctttggcagcctgagaaagaagaggcag
gatgagagtgaggagtatgtctgccccatggacgtggagatgccaaagggacgtagcttc
caaaaaggctatgagctctacgaggacgatctggaccggctagaacagatggaggactcc
gagggaactgtgaggcagattggagccttctctgagggcatccaaaacttgacgagcatg
ctgaaagatgacgaattcttcaaagagatctctaactctcccaaccccagcgtaacagat
gacgattccaacatttga
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