Oncorhynchus masou masou (cherry salmon): 135524282
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Entry
135524282 CDS
T10723
Name
(RefSeq) interferon regulatory factor 7-like
KO
K09447
interferon regulatory factor 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04620
Toll-like receptor signaling pathway
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
omm04623
Cytosolic DNA-sensing pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135524282
04621 NOD-like receptor signaling pathway
135524282
04622 RIG-I-like receptor signaling pathway
135524282
04623 Cytosolic DNA-sensing pathway
135524282
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135524282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135524282
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135524282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
135524282
NCBI-ProteinID:
XP_064807760
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All DBs
Position
31:66036638..66047246
Genome browser
AA seq
419 aa
AA seq
DB search
MQSCKPQFADWLIEQVRTEQYTGLFFIDNNKFRVPWKHNSRKDCSEDDRKIFKAWAVVSG
KINEHPTDNAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESSHIEEI
TLENYGLDCALIPTENTPPGMEHDILNFSNLTLNPLDLNQHTENSILVHTHHPVPPVPPE
LVQQPYYQVNPDALLNLPTAHSSLWGLEITISYRGSEMRKTQVSGPRVQLHYQCNALEPN
TQPLCFPSTDGLPDHKQIEYTNCILGSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSDPRE
AHPEPRKMPQNEMVQLLSFQQYENELIAFKENRRGSPDYTIHMCFGEKFPDGKPLEKKLI
VVKVVPLICRYFHEVAQEEGASSLQNDNISLQISHHNSLMELINATWPDGPQQAMGQYF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaggtacggaccgagcaa
tacactggtttgttctttattgacaacaataagttcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcaaggcatgggcagtggtcagtggg
aaaatcaatgagcatcccactgacaatgcaaagtggaagaccaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtctacctggtcatcaatgagtataactatgagagctcgcacatagaagaaatc
actctggagaactatggccttgactgtgctctcatccctacagaaaacacacccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccccctagacctgaaccaa
cacacagagaattctatactggtacacacacaccacccagtgccaccagtgccaccagag
ctggtacagcagccatactaccaagtaaatccggatgccctgctcaacctgcctaccgcc
cactcatccctctggggtttggagatcaccatctcctatagggggagcgagatgcgaaag
acccaggtgtcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaac
acccagcccctctgcttccccagcactgacgggttgccagaccacaaacagattgaatac
accaactgcatcctaggaagcgtccaaaggggtcttctcctcgaggtacaaaacactggt
atctatggttaccggcaggacaagtgccacgtgttctccagtactagcgaccccagagag
gcacaccctgaacccaggaagatgcctcaaaatgaaatggtacaactgttgagcttccag
cagtatgaaaatgagctgatagcatttaaggagaacaggcgaggctctcctgactatacc
atccacatgtgctttggtgagaagttccctgacggaaaacccctggagaagaaactcatt
gttgtcaaggtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggg
gcgtcatccctccagaatgacaacatcagcctgcagatctcccaccacaacagcctgatg
gagctcatcaatgccacctggcccgacggcccacagcaagccatggggcagtacttctag
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