Oncorhynchus masou masou (cherry salmon): 135524352
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Entry
135524352 CDS
T10723
Symbol
rnf180a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135524352 (rnf180a)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135524352 (rnf180a)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135524352 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Nop53
RING_XB3-XBAT31
zf-RING_6
zf-ANAPC11
E3_UbLigase_R4
FYVE
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
135524352
NCBI-ProteinID:
XP_064808293
LinkDB
All DBs
Position
1:complement(43563606..43573326)
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AA seq
317 aa
AA seq
DB search
MDITETQCGMYTVREPGAFWVEPGIGQLSPRRRTRTRLFSNSSLELEEEEDEEEEGEEEE
EEEGGGEAGGSGVIGLVTQTLTTAVPLSPAPAAMDRRMTKRERNRVKSLRKRQRRRERWR
QSQLLENRQSSTGNASSSSEEEEEDVSAGDREGFICAVCLDVYFSPYMCHPCNHIFCEPC
LRTLAKNSPTNTPCPLCRTTITHVFFQTELNHTARTFFPKEYFSRKQTFQKASCAKWPLP
SCRKLFRIFGGFQRQASPIARRQFPHGGYRLDAMDFEDNSRGWRFDIDMVIIYIYSVNWV
IGFIIFCFLCYFFFPSF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggacatcacggaaacgcaatgtggcatgtacacggttagagagccaggtgcattctgg
gtagagccagggattggccaattgtccccgagaagaaggactcggacacgcctcttctcc
aacagcagcttagagctggaagaggaagaggatgaggaagaagagggagaagaagaggaa
gaggaggagggaggaggagaggcagggggtagtggtgtgatagggttggtgactcagact
ctgactacggctgtgcccttgtcccctgctccagcagcgatggataggaggatgactaaa
agagagaggaacagggtgaagagtctgaggaagaggcagaggaggagagagagatggaga
cagagccagctgctggagaatagacagagttcgacggggaacgcatcgagcagcagtgag
gaggaggaggaggatgtgagtgccggggacagagagggcttcatctgtgctgtgtgtctg
gatgtttacttcagcccctacatgtgccacccctgtaaccacatcttctgtgagccctgc
ctccgtaccctggctaagaacagcccaaccaacaccccttgcccactctgcaggaccacc
atcactcacgtcttcttccagacggagttgaaccacacagcacggacgttcttcccaaag
gaatacttttcccggaaacagactttccagaaggcaagctgtgcaaaatggccgctccca
agctgcaggaaacttttccgtatttttggaggtttccagagacaagctagtccaatagcc
aggcgtcagtttccccacggggggtaccgtctagacgccatggactttgaggacaattct
cgtggctggcgctttgacattgacatggtcattatctatatctattctgtcaactgggtc
atcggcttcatcatcttctgctttctctgctacttctttttcccttctttctaa
DBGET
integrated database retrieval system
