Oncorhynchus masou masou (cherry salmon): 135524427
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Entry
135524427 CDS
T10723
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135524427 (ctcf)
03036 Chromosome and associated proteins [BR:
omm03036
]
135524427 (ctcf)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135524427 (ctcf)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135524427 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
135524427
NCBI-ProteinID:
XP_064808020
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All DBs
Position
31:74752020..74759142
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AA seq
800 aa
AA seq
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MKYSFLVQVLPMDGGPTDVVVEAKDSITYEGEEVVADLLQQAAEGVMDQQPVGEGGLDPQ
ELVDGVNVEMMVMDSLDPALLQMKTEVMDAPVITAHEATVTTVDETQIITLQVVNLEEQQ
LGGLGELQLVQVPVSAVPVTQATVEELQGTFVDATAMPKDGNPMICHTLPLPEGFQVVKV
GANGEVETVEQDELQHQEEQQVQPEEEEEELQCETQPDDPQWTTDPDYQPPAKKTAKKAK
KSKLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTF
QCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQD
CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSY
ASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI
ARKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQ
ERHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKTFTR
RNTMARHAENCNGDPTEGENGTPPKRGRGGRKRKMRSRKDDDDDDDDSEDNADPELDDID
EEDEDAEEALLEEDEEEMELEQAPPTKPIPAPVEPPVKRKRGRPPKNAPKPASPAKTSKA
ALKGKAAAAAAIIQVEDENTGVIENIIVKNEPEAEQAAIEVVVEQSEEAEAGVETVELPV
AEAAPNGDLTPEMILSMMDR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcatttctggtgcaggtattaccgatggacggcggaccaaccgatgtcgtg
gttgaggccaaggacagcatcacctatgagggggaggaggtggtggcagacctgctccag
caagcagcagagggggtaatggaccagcagcctgtgggagaggggggcctggatccccag
gagctggtggatggagtcaatgtggagatgatggtaatggattccctggaccctgccctg
ctgcagatgaagactgaggtgatggacgcccctgtgatcacagcccacgaggccacggtc
accacagtggatgagacccagatcatcactctgcaggttgtcaatttggaggagcagcag
cttggaggccttggggagctacagctggtccaggtgcctgtctctgctgtgcctgtaacg
caggccactgtagaggagctacagggcaccttcgtggatgccacggccatgcccaaagat
ggaaaccctatgatctgccacaccctgcccctgccagagggcttccaggtggtgaaggtg
ggtgcgaatggtgaggtggagacggtggagcaggatgagctccagcaccaggaggagcag
caggtccagcctgaggaggaggaggaggagctgcagtgcgagacccagcctgacgatcca
cagtggaccacagacccagactaccaacccccggccaagaagactgccaagaaagcaaag
aagagcaagctgcgctacaacactgagggggacaaagacaacatggacgtgtctgtctat
gactttgaagaggagcagcaggagggaatgctctctgaggtcaacgcagagaaggtggtg
ggcaacatgaagccccccaaacccaccaagatcaagaagaagggtgtgaagaaaacattc
cagtgtgagctgtgtagctacacctgtccccgccgctccaacctggaccgacacatgaag
agccacacggacgagaggccacacaagtgccatctgtgtggaagggcctttaggactgtt
accctgctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagat
tgtgacatggcctttgtgaccagcggagagctggtccgacatcgtcgctacaagcacact
catgagaaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagcta
aagcggcacatccgttcccacactggggagcgtccgttccagtgcagtctgtgcagctac
gccagcagagacacctacaagctgaagagacacatgaggacacactcaggagagaagccg
tatgaatgctacatctgccacgcccgtttcacccagagtggaaccatgaagatgcacatc
ctgcagaagcacacagagaacgtggccaagttccactgcccccactgtgacacggtcatc
gcccgcaagagtgacctgggcgtccatctgcgtaagcagcactcgttcattgagcaggga
cggaaatgccgttactgtgatgctgtgttccacgagcgctatgctctcatccagcaccag
aagtcccacaagaatgagaaacgcttcaagtgtgaccagtgtgactactgctgcagacaa
gagcgtcacatgctgatgcacaggcgcacgcatacaggagagaagccgtacgcctgtagc
cagtgtgagaagaccttccgtcagaagcagctcctggacatgcacttccggcgctaccac
gaccccaactttgtgcctactgcctttgtgtgcaccaagtgcggcaagaccttcacccgc
aggaacaccatggccagacatgcagagaactgtaatggggatcctactgaaggagagaac
ggaaccccgcccaagagaggacggggtgggaggaagaggaagatgcgctcaaggaaggac
gatgatgatgatgacgacgatagtgaggacaatgctgatcctgagctggatgacattgat
gaagaggatgaggatgccgaagaggcactgctggaggaagatgaggaggagatggagttg
gagcaggctccacccaccaagcctatccccgcccctgtggagccgcccgtcaagaggaaa
cggggtagaccccccaagaatgcgcccaaacctgcctcacctgccaaaactagcaaggct
gcccttaagggcaaggctgctgcagcagcagccatcatccaggtggaggatgagaataca
ggtgtcatagagaacatcatagtgaagaatgagccagaggctgagcaggctgccatagag
gtggtggtggagcagtcggaggaggcagaggcaggggtggagacagtggagctgcctgta
gcagaggctgcccccaacggagatctcacccctgagatgatcctcagcatgatggaccgg
tga
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