Oncorhynchus masou masou (cherry salmon): 135524432
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Entry
135524432 CDS
T10723
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135524432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135524432
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135524432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
135524432
NCBI-ProteinID:
XP_064808033
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All DBs
Position
31:complement(75009281..75014951)
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AA seq
229 aa
AA seq
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MSVVPPNRPSTGWPRRGLNQFENKYISPSSKPVTLERTINLYPLTNYTFGTKEPLYEKDS
SVTARFQRMRDEFEKVGMRRAVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEV
DGLKRLMTEILGHQDGVKQDWVIDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtacctcccaaccgaccttcaaccggttggccacgccgtggactgaaccag
ttcgaaaacaaatacatcagcccgtcttccaaacctgtcacgctggagagaaccatcaac
ttatatcccctcacgaattacacgtttggcacaaaggaacctctctacgagaaggatagc
tcggtaacggctcggttccagaggatgcgggatgagttcgaaaaagtaggcatgaggcgg
gcagtggagggtgttctgatcgtacacgagcacaggctaccacacgttctactgctgcag
ttggggacaacctttttcaaacttcctggtggagaattgaatgcaggggaggacgaagtg
gatggactgaagcgattgatgacagagatcttggggcatcaggatggagtgaagcaggac
tgggtgatcgatgactctattggaaactggtggagacccaactttgagcccccacagtac
ccctacatcccagcacacattaccaaacccaaagagcacaagaagctctttttggttcag
ttgcaggaaaaagcactgtttgcagtgcccaagaactacaagctggtggctgcccctctc
tttgagctgtatgacaatgccccaggctacgggccaatcatatccagtctcccacaactg
ctgagtaggttcaacttcatatacaattaa
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