Oncorhynchus masou masou (cherry salmon): 135524793
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Entry
135524793 CDS
T10723
Name
(RefSeq) transcription factor SOX-10-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135524793
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135524793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135524793
NCBI-ProteinID:
XP_064808688
LinkDB
All DBs
Position
4:16891654..16895019
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AA seq
496 aa
AA seq
DB search
MSGEEHSLSEAELSPGGSDDGHSLSPAHSGATGGRDSPLIGPSQQLTGLSGADGGGEDGG
LVPKSEVDMDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKSKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQPR
RRKNGKLGTNGEGGEGAEGEGSHAQSHYKALHLDVHSTGAGSPLADLHHHHHHHPAGQGH
SPPTPPTTPKTELQSGKMTEGKREGGGGSGSSRGGGLGVGAEGASGGHSSAGGKPHIDFC
TMDIGEISHDVMANIEPFDVNEFDQYLPPNGHPGVVQGGAATSSSSATSYAYALAAASGH
SAAWLSKQHQHQQPSPSASEATKAQIKSESGAGSHYAETSSSSSGTHVTYTPLSLPHYGS
AFPSLPSRAQFEYGEHQAPGPYYTHTSQAPGLYSAFSYMGPSQRPLYTTITDPSSVAQSH
SPTHWEQPVYTTLSRP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaggagcacagtctatccgaggcagagttgagtcccgggggctcagatgat
ggtcactctctgtcaccggcacactccggggccaccggcggccgggactccccgctcatc
ggtccgtcgcagcaactgactgggctttctggcgcagatggcggcggagaggacggtgga
ctagtacccaagtcagaggtggatatggaccggttccccatcggcatccgcgaggcggtc
agccaggtgctggacggatacgactggacgctcgtgcccatgcccgtgcgcgtaaacaac
gggaacaagagcaagccgcacgtgaagaggccgatgaacgccttcatggtgtgggcgcag
gccgcgcgccgtaaactggcggaccagtaccctcacctgcacaacgcggagctcagcaag
acactcggcaaactgtggaggctcctgaatgagagtgacaagaggcctttcattgaggag
gcggagcgactgcggaaacaacataagaaggactacccagagtacaagtaccagccccgc
agacgcaagaacggcaagctggggaccaatggtgagggaggggagggagcagagggggag
ggcagccacgcccagtcccattacaaggccctccacctggatgtgcacagtacaggggct
gggtcccccctggccgacctccaccaccatcatcatcaccaccctgcaggtcagggtcac
agcccgccaacaccccccaccaccccaaagacagagctccagtctggaaagatgacggag
gggaagagggagggcggaggtggctcagggtcctcccgtggaggaggcctgggggttgga
gcagagggggcctccgggggccattcatcagcgggcgggaaaccccacatcgacttctgc
accatggacatcggcgagatcagccacgacgtgatggccaacatcgagcccttcgacgtc
aacgagtttgaccagtacctgccgcccaacgggcacccgggggtcgtccagggcggcgcc
gccacatcaagctcctccgctacatcctacgcctacgccctcgctgctgccagcggccac
tcagccgcctggctctccaagcagcatcagcatcaacagccctccccctctgcctcagaa
gccaccaaggcccagatcaagagtgagtccggggccgggagccactacgcagagacttcc
tcctcttcgtcagggacccacgtcacctacacccccctcagcctcccccactacggatca
gccttcccctcgctgccctccagggcccagtttgagtacggggagcaccaggctccgggg
ccgtactacacccacaccagccaggccccggggctgtactcagccttctcctacatgggg
cccagccagaggcccctctacactaccatcactgacccctccagtgtggcccagtctcac
agtcctacacattgggagcagcctgtctataccaccctgtcacggccatga
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