Oncorhynchus masou masou (cherry salmon): 135524801
Help
Entry
135524801 CDS
T10723
Name
(RefSeq) cysteine protease ATG4B-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04136
Autophagy - other
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135524801
04136 Autophagy - other
135524801
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135524801
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135524801
03029 Mitochondrial biogenesis [BR:
omm03029
]
135524801
Peptidases and inhibitors [BR:
omm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
135524801
Membrane trafficking [BR:
omm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
135524801
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135524801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
135524801
NCBI-ProteinID:
XP_064808699
LinkDB
All DBs
Position
31:97603497..97625543
Genome browser
AA seq
433 aa
AA seq
DB search
MDAATLTYDTLGFGELEDFPETSEPVWILGKEFNALAEKDDILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWVRGQPQRGQYISILNAFLDKKD
SYYSLHQIAQMGVGEGKSVGQWYGPNTVAQVLKKLTVFDSWSRLAVHVAMDNTVVMEEIK
RLCMPWLDYGGAACAEPPGWMPKHNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINK
AYIETLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDGQVPDD
TYHCQHPPCRMHICEIDPSVTVGFFCRTEDDFDDWCMCIRKLSHTRGSLPMFELVDCQPS
HFACSVDVLNLTPGEIQAGIQSEVRCGQAHCTTDKAPFKGNFPDVRGDRVHDFSDRSERI
FDSEDEEFEILSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacgtacgacacacttggctttggagagttggaagattttcca
gagacctccgagccagtgtggatcttggggaaagaattcaacgcactcgcagaaaaggat
gacattctttcagatgtcacttcacggttatggttcacctacagaaaaaacttcccaccc
attggagggacagggcccacgtccgacacaggctggggctgcatgctgcgatgtgggcag
atgatcctaggcgaggccctggtctgcaggcatctaggccgagactggagatgggtgaga
ggccagcctcagagaggacagtacatcagtatcctcaacgccttccttgacaagaaagac
agctactattctttacatcaaattgcccagatgggagtcggggaggggaagtctgtaggc
cagtggtacggaccgaacacagtggcacaggtactgaagaaactaaccgtgtttgactcg
tggagtcgtctggcggtacatgttgctatggacaacaccgtggtgatggaggagatcaag
cggttgtgtatgccctggctggactatggtggagcagcgtgtgcagagcccccggggtgg
atgccgaagcataacggctgcctggagggggcctgtgccctggctgaggaggagacggct
ctctggaagcccctggtcctcctcatccctctcaggctgggcctgagcgacatcaacaag
gcctacatcgagaccctgaagcaatgcttccagctgccccagtccctgggtgtcatcgga
gggaaacccaacagtgcccattacttcataggctatgttggagaggagttgatctacctg
gacccccacaccacccagcctgcagtagagccctgtgaggacggccaggtccccgacgac
acttaccactgtcagcatccgccgtgccgcatgcacatctgtgaaatagacccctccgtc
acagtgggtttcttctgcagaacggaggacgacttcgatgactggtgtatgtgtattcga
aagttgtcccacactagaggaagcctgcctatgtttgagctggtagactgtcaaccatct
cacttcgcctgctctgtagacgtgctcaacctcactccgggtgagattcaggctgggatt
cagtcagaggtgcgttgtggacaagcgcattgcactaccgacaaagcgccttttaaaggc
aatttccctgatgttcgcggagatcgcgttcacgatttctcagaccggtcggagcggatc
tttgattcggaggatgaagagtttgagatcctgtccctgtga
DBGET
integrated database retrieval system
