Oncorhynchus masou masou (cherry salmon): 135525254
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Entry
135525254 CDS
T10723
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135525254
Transcription factors [BR:
omm03000
]
Eukaryotic type
Other basic domains
RF-X
135525254
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
135525254
NCBI-ProteinID:
XP_064809048
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All DBs
Position
31:61310936..61355581
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRCSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEGYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEQEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPTAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSSGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGTPRLHPTPVTPRWADVSPANSCYTSPPIHSSRYATSGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagaacgagagcaagcggtgttccagccacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatccaaaccacattcaacaccagcc
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaaggctgggg
acaaggggacagtcaaagtaccactactatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtattccaagaagggggcggcgtgggtgaacgagactggcaagaaggag
gtcaccaagcaaacagtggcgtattcaccacgctccaaactggggacgctcctgccagac
tttccaaatgtcaaagacctaaatctgcccgccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccacacatgctc
cctgtcctgggctcctccactgtggtcaacattgtgggcgtctgtgactccatcctctat
aaggcaatctctggggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggttatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcatcatccacttg
taccaggagtttgaccgtcttttggaggagcagtctcctatagagggctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgctcatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagctttggctcgttccacctgatccacctgatgttt
gatgactatgtgctgtacctactggagtccctgcactgccaggagagggctaacgagctc
atgcggtccatgaaggcagagggcaacacagctgagcaagaggaagagatgatgctgacg
gagaccacgcccacatccacgtctccagggcctttctccccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccactgctgcccagtccccagagtacacaggggcc
acagccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaagcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctccgcccatcgactgccagtctacgcacaccgggatgagcacggg
ttcactgggagctataactacggaagctactccaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggcattcctgcccccctccattatcccgcctac
caccgcacttctgcacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcctgtgaccccccggtgggctgatgtctca
ccggccaacagctgttacaccagtccccctatacactcctcccgctacgccacctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtatgaacactctcaacacttt
cccggtttcgcctacatcaacggagaggccactacaggctgggccaagtag
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