Oncorhynchus masou masou (cherry salmon): 135525352
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Entry
135525352 CDS
T10723
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omm03037
]
135525352 (crocc2)
Cilium and associated proteins [BR:
omm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135525352 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUMA_CC
CCDC39
ATG16
CENP-F_leu_zip
ADIP
Motif
Other DBs
NCBI-GeneID:
135525352
NCBI-ProteinID:
XP_064809126
LinkDB
All DBs
Position
31:complement(98287225..98392247)
Genome browser
AA seq
1522 aa
AA seq
DB search
MDDFQKVLTSITQLVHGGEDGYVSGGQPSSSSSSSPLRGLTSQCNSTLMAVKGLLSQHQV
QTQDLRSRLDAALGQVDILQSNLQEEEEQRRHLERKMKEVQRENQQVERSLEEKHRDNQR
FHTSLDLLNSEKVSLEKLVVGLQQKTESLGAELEVMRGSAGDLQRQRDLLRQQRDDLERQ
LERQRTEAQRGERSLEQLDGKNSDLRRELVTVREALSQVTLQKEVLDDEKSSLTLALSKM
ESQSAEQELSVTKLQYQEASLRDSLAKMAALSEGLANDKVELNRILLQIEGEKAELGERR
REAEVERASAREEMGRLQQELQDLTADRRSLESSYSLLQETNQRLEAELALLQRENNQIL
EQQAQINKQVQSLSDQLTSCRRELDSKAVALQRAHHDREDVAKDKASLGVQLTAVDRRAW
GLEQELAILRAEKESLETCVFEGQELVSSLEGERNRLEVERSTLTMADEDLTREVARLKA
EVELQVSRAAQEREELETKLAHAERNHRIALSTKEHSHREHLEQEHVDKEQQCVNLILQR
ERAEAQLRSHCEQQRLQSQADLQQLQEEMVQLQQVCNNSLLQAESTKQQALSQKEGEKAA
LTERLAGLQQDLETARLEMERGRRDALSLHEQDKDSIAGLQCELQSLRSRFEESLSSHES
SEKSLTEQVRELNQQRETARHEVEGLRRDLHQAEDERDAGREELIESHRELREVAQVRDD
QRKEVLDLRRLLGDEIRDKEAIHSSNQELRAAVKRAENDNNSLRRSLEDKEQKVVVLEVC
KISLQQEVSKLRSTMRELEKSRLQARRELQELRRQVKILEREAAQQREEMGELQARVCQE
EVKEEEARRESFSLKQRVLESEAGREAAIKEASGLQRRIVELEDVERQMGEVLAEREAGL
QQSLLLHCEETSKLVVALEEQSTQVRELTLRVSLAEGRAQGLEEQLGHGEAQRRELEHRL
VGLTSALRRTLGIGRSQTPGSRGRSPSPWRSRSPVKGETSTSPGGPVSFPSCSDEGELDV
DAVQRALRDFHQELKDTKRHRDEAKSQVTSLTWQVAELQTSQDKSSTRLQQLTKALKGLE
EGKREVSEQLYGAQSSLSLQEEVTRRGDRDRKSLAEEVVKLKTSLQTSEANSRTLQEKLD
LSRAGEARCEGERRRLKEALETAESRASRLELTQRTLEGELERAQRRAAELEGEVAALGE
RLAELRRELGVTEDRAAGLRLNEERLATALAWAELQEGQLREQLQRLSTSLNDSSATVGA
MQEQTTQLQMALTVSDQDRRLMQERVDKMREALSNSKRQNHALTERIQSLQRTQEDTDLR
ASELEKQTRTLKKTVKQRQESAELAAQESSTLQQKDREELQGRLKKMEGERAELENLLAR
LGKDKASLRKTLEKVELERLRREEEATTAAREREQLGQTVLSLEQEVNHRQLEMQTVQAQ
MTQLERSHAQHLLEVTSHHRREMDSETERLRATQLQAERALETREKAHRQRVTVLEEQVL
ALKEQLDQEMRRRQAYVNQILR
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggacgactttcagaaggtcctaaccagcatcacacagctggttcatggtggtgaggat
ggttatgtctctggtggtcaaccttcgtcctcctcctcctcctcacctctccggggcctc
acttcccaatgcaacagcaccctgatggctgtcaaaggtctcctctcccaacaccaggtg
caaacacaggacctgcgtagccggctggatgcagccctggggcaggtagatattctacaa
agtaatctgcaggaggaggaggagcagaggaggcacctggagaggaagatgaaggaggtg
cagagggagaaccagcaggttgagaggagtctggaggagaaacacagagacaaccagagg
ttccacacctccctggacctcctcaacagtgagaaggtcagcctggagaagctggttgtg
ggcctccagcagaagacagagtccctgggggcagagctggaggtgatgagggggtcggct
ggggatctccagagacagagagacctgctccgccagcagagagacgacctggagagacag
ctggaacgccaacgcaccgaggcccagagaggtgaacggagtctggagcagctggatgga
aagaacagtgacctgcgcagggagctggtgacagtcagggaggctctgagtcaggtcacc
ctgcagaaggaggtcctagatgatgagaagagtagcctcaccctggctctcagcaagatg
gagtcccaaagtgcagaacaggagctgtcagtcaccaagctacagtaccaggaggcgagc
ctaagagactctctggccaagatggctgccctgagtgaaggcttggccaacgacaaggtg
gagctcaaccgcatcctgctacagatcgagggtgagaaggcggagctaggtgagcgtcgt
cgggaggcggaggtggagagggcttcggccagggaggagatggggaggctgcagcaggag
ctccaggacctgaccgctgacagacggtccctggagagctcctatagcctcctgcaggaa
accaaccagagactggaggctgaactggcactgctgcagagggagaacaaccaaatcctg
gaacagcaggcacagattaataagcaggtccagtccttgtccgaccaactgacttcctgc
cgtagagagctggacagcaaggctgtggccttacagagggcccatcatgacagagaggat
gtggccaaggacaaggccagtctgggggtccagctgactgccgttgaccgcagggcatgg
ggcctggaacaggagctggcgattctcagagcggagaaggagtctctagagacgtgtgtc
tttgagggccaagagctagtttcttcactggagggggagaggaaccgactggaggtggag
cgaagcaccctaacgatggctgacgaggacctgacgcgcgaggtggcccgtttaaaggcg
gaggttgagctacaggtgtcccgggcggcgcaggagagagaggaactggaaaccaagctg
gctcatgcagagaggaaccaccggatagccctcagcaccaaagaacacagccacagagaa
cacctggagcaggaacacgtcgacaaggaacagcagtgtgtgaacctaatcctgcagagg
gagcgtgcagaggcccagctacgatcccattgtgagcagcagcgtttgcagagccaggct
gacctgcagcagctgcaagaggagatggtccagctgcaacaagtctgcaacaatagcctg
ctgcaggccgagagcactaaacaacaggccctgtcccagaaggagggggagaaggcagcc
ctgacagagaggcttgcaggcctacagcaggatctggagacagcaaggctggagatggag
agaggcaggagagatgctctgagccttcacgaacaggacaaggacagtatagcaggtctt
cagtgtgagctgcagtccctgcgttctcgcttcgaggagtctctgagttcccatgagtca
tcagagaagagtctgactgagcaggtcagagagctcaaccagcagagagaaacagcacga
catgaggtggagggtcttcggcgggacctccatcaggcagaggacgaacgtgacgcaggg
cgagaagagctgatcgagtcccacagggagctgagggaagtggctcaggtgagggatgac
cagaggaaggaggtgctggacctcaggaggctgctgggggacgagatccgagacaaggag
gccatccactcctccaaccaggagctcagagctgcagtgaagagagcagagaacgacaac
aacagtctgcggcgtagcctggaggacaaggagcagaaagtggtggtgctggaggtgtgt
aagatctccctgcagcaggaagtgtccaagctgaggagcaccatgagagagttggagaag
tcccggctgcaggcacgcagagagctgcaggagctacgcagacaggtgaagatcttagag
agggaggctgcccaacagagggaggagatgggagaactgcaggccagggtgtgtcaggag
gaggtgaaggaagaggaggcgaggagggagtccttcagtcttaaacagagagtcctggag
agcgaggcgggcagggaggcggccatcaaggaggcttccgggctgcagcgtcgtattgtg
gagctggaggacgtggagcgtcagatgggggaagtgctggcggagagagaggcggggctt
caacagagtctcctcctccactgcgaagagacctcaaaattagtggtggcactagaggag
cagtctactcaggtaagggagctcaccctgcgtgttagcctagcagagggccgtgctcag
gggctggaggagcagctaggacacggggaagcccaacgcagagagctggagcacaggctg
gtcgggctgacctctgccctgagacgaaccctcgggataggacgctcacagacccctggg
tccagaggaagaagcccctccccctggagaagtcgctcacctgtgaagggtgaaaccagc
acatccccgggaggtcctgtgtccttcccatcctgtagtgatgagggggagctggatgtg
gacgctgtgcagagagccctcagggacttccaccaggaactcaaagacaccaagagacac
agggatgaagccaagtcccaagtgaccagtctaacctggcaggtggccgagctacagacc
agccaggacaagtcaagcactaggctgcaacagttgaccaaagccctgaagggcctggag
gaggggaagagagaggtgtctgagcagctgtacggggctcagtcctccctctccctgcag
gaggaagtgacacggcgaggggacagggacaggaagagcctggcagaggaagtagttaaa
ctcaagaccagtctgcagacctctgaagctaatagtaggacactgcaggagaagctggat
ctttcccgggccggggaggctcgctgtgagggggagcgtcggaggctgaaggaggccctg
gagacagcggaaagccgggcatcgcgtctggagctcacccagaggaccctagagggagag
ctggaacgggcacagcggagggcagccgaactggaaggagaggtggcagccctgggcgag
aggctagcagagctgagaagagagctgggggtgactgaggaccgggcggctgggctgagg
ttgaacgaggagcggctggctacggccctggcctgggctgagctccaggagggccagctg
agagagcagctccagaggttgtccacctctctcaatgacagtagtgccactgtaggagcc
atgcaggagcagaccacccagctgcagatggctctcaccgtctcagaccaggaccgaagg
ctcatgcaggagcgtgttgataagatgcgtgaagccctgtctaacagtaagagacagaac
catgccctgactgagaggatccagagcctccagaggacacaggaggacactgacctacgg
gcctcagagctggagaaacagaccaggactctgaagaagaccgtgaagcaaaggcaggag
tctgcagagctcgctgcccaggagagctctacgctacagcagaaggacagggaggagctc
caggggaggttgaagaagatggagggagagcgggcagagctggagaacttgctggcccgt
ctggggaaagacaaggcttcactcagaaagactctggagaaggtggagttggagaggttg
aggcgggaggaggaggcaacaacagcagccagagagagagaacagctgggacagacagta
ctcagcctggagcaggaagtcaaccaccggcagctggagatgcagacggtgcaggcccag
atgacccagttggaacgctcccatgctcagcacctcctggaggtgacgtcccaccatcgt
cgggagatggactcggagacagagaggctgagggcgacgcagctacaggcggagagggct
ctggagaccagggagaaagcccatcgtcagagggtcacagtcctggaggagcaggtgctg
gcgctgaaggagcagctggaccaggagatgaggaggaggcaggcctacgtcaaccagata
ctgagataa
DBGET
integrated database retrieval system
