Oncorhynchus masou masou (cherry salmon): 135525466
Help
Entry
135525466 CDS
T10723
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11 isoform X1
KO
K23368
thyroid receptor-interacting protein 11
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135525466 (trip11)
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
135525466 (trip11)
Retrieval pathways
135525466 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
Mod_r
HOOK
GAS
NPV_P10
Motif
Other DBs
NCBI-GeneID:
135525466
NCBI-ProteinID:
XP_064809185
LinkDB
All DBs
Position
32:complement(3688239..3753618)
Genome browser
AA seq
1993 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISTFTKDMLLEGVEEVRDASTELLVSSSKQE
QVEAELERLKRIHGELEEKLEASEIQNKQQSAEYRTLLQQKDVEISHLKARQSGLQEEVQ
KLQHSAQSATSDPAVLPVTTASTTTTSSSYMTRPLGAPHHHQGFHGSDEMDFGDVIWSQQ
EINRLSTEVMRLEAEVSHWRRVSQASVAPGAGNSDQGEVLKLQRIIKELREEMGREVDEH
QHELAALQDAQRQKMADVIRRHRDELAEYEERIEELEEQGQTGASSSATANALQESSMLA
DLQNTIQSLQEAAKERLKEEQDEQLKEQLKELTANLEEAGKRQATLQQEKEEAQAENAEL
LQNYTRLQTSVTELQSRVQEQEGKARNKAQLDQEIQGLRNALAGAEKEISKLKSLQSETK
MEVEHADILELNTVIGTLRKEKRNLQERLARAEERVESDSLDGCESSPSATEQLSGLRAE
LEKSEQSLSEIQEERETLLNELEELDRQNQQATQHVISVKEQLSVQLKESEAVVARLQSE
LSTAADQRVALQQELKAQQEKLSHSAFTLNDLHMGKQQLEDTVKELRNKLGRATEMGKEA
RRETQDFQRTIQEREEQLSAARAELCEAGERGRESGGSIEQLEELRRELAEMRSSQEKMM
SEDYEMKMEKQRLKMEAEQAQGRIEELARQVREVQAALTRTVLEKDTRIQALKLEKSQLE
GELGQTEKGLQEQTRQYQQTIEELTAARSMDASALQTEHERTVRLNQEKDLEISQLKRDV
EQMSSDHRDTNEMLSITVAGQKQLSDLLQEKDSFTESLRANMAATQRELEAGVQAATQEA
ETLRGALEEKDKQLGGMKEDNSHLKEEIDRLRDQQNRPQPSGLSEPRTLDIITELENEIS
QLKSTRDGLEEEGHSLKRRVEEQRCHLLSSQQSLLAQQNELEQAHQRHEQSRENYDRLIH
AKDEEIGRLQLEVDHLGHTHSSQEQEVVILQQEDKTQSSLNNGENDNEKHDLSKVEINRL
VQGIKEKETEISQLNENNLNLTRQLAQLVVSREEIGKLSQMLLQKDLEIQALHARVSLGG
HSQDVMFLQQQLQAYAVEREQVLAVLNEKTRENSQLRGDYQRIMDIVAGKEAVLLKVQQE
NQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVSVLQAGDSGGVSSN
QFEELLQDRDTLKQQVKKMEEWKMQVITTVKNMQHESGQLVEELHKLQGQVDADNDCTST
LSVDYSRLIHSYEQKERKLGSLSHELAHVQQTISQLSSTKDVLLGKLDSVAQSPQVTPLS
AALTSTAQHPAAVEPPRHQVAAPATPGNQEGLRQELESLRALLSERETMIRTLQENNHRL
CNSAQVSDSEQRGQAEEARQVKERLDVLQRSVREKDLLIKTKGDQLTQVSESLRNRESDN
EVLKQAVTNLKERALILEMDTRKLKDENEAVAQRSREKESEFRALQETNMQVSLLMREKE
FERSAMSEKAAAMEKMLKDREQGNSQKSGELNQLLNELRSMQEKAVAFQQERDQVMLALK
QKQMETTAVQTELQHVKDREQRLKLELDRLRNHLLEIEESYTREVLAAEDREAELRKRVT
LLDDRLATSSSQVESTSHQASLQVESLQEQLSGTVRQRDEASTQLRAARDQVNQYAVSLS
NLQMVLEQFQQEEKAMYSSELDKYKREKDEWRRKALKLEDKASALQINLDEANAALDSAS
RLTDQLDLKEEQLEELKKQVDVRQEMLEESQDKLMNLLNSTEGQVDQALMRNLFMGYFHT
PKPKRSEVLRLMGSVLGLDKDEVNQLLEEEGGHGVGGWVSGWLGGRAVQSVPNTPQRPGA
GQGGFNNSFSEMFVKFLEVESRPALPAPRLPVYDIKPLSAPPPGRTTSSAWAQQPEGGAA
AGRGQRAAGESNPFLAPRSAAVPLMHHGSGSSSASGGHHHLLMKPISDNLPTFTPVPVSA
ESGGQVLKDLLKQ
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtggctgggtggactgggctccggcctgggccagtctctcggccaggtcggg
ggaagcctctcctcattcaccggacaaatatcaaccttcaccaaagatatgcttctggaa
ggagttgaagaagttcgagatgcttccactgagctgctggtgtccagttcgaagcaggag
caagtggaggctgagttggagcgtttaaagaggatccatggcgagctggaggagaagctg
gaggcctcagagatccagaataaacagcagtcagctgagtacaggactctgctgcaacag
aaagatgtggagatcagtcacctgaaagcccgtcagagtggactacaggaagaggttcag
aaactacagcactctgctcaatcagctacttccgaccctgccgtactgcccgtcaccacc
gcctccaccaccaccacctcttcctcttacatgacccgccccctgggggccccccaccac
caccagggtttccatggcagcgacgagatggacttcggtgacgtgatctggtcccagcag
gagattaatcgtctgtctacggaggtgatgaggctggaggctgaggtctcccattggaga
cgcgtgtctcaggcatccgtagccccaggggcaggaaacagtgaccagggagaggtcctg
aagcttcagaggatcatcaaggagctgcgtgaggagatgggtcgtgaggtagatgagcac
cagcatgagttagcagcgctgcaggacgctcagagacagaagatggccgacgtcatccgg
cgccaccgggacgagctggcagagtacgaggagaggatagaggagctggaggaacaggga
cagactggagcttctagttcagccacagccaacgctcttcaggagtcctccatgctcgca
gacctccagaacactatccagtccctccaggaggcagcgaaggagcggctgaaggaggag
caggatgagcagctgaaggagcagctgaaggagctgacagctaatctggaggaggcaggg
aagagacaggctacgctgcagcaggagaaagaggaggcgcaggcagagaacgctgagctg
ctgcagaactacactcggctgcagacgtctgtcacagagctccagtcacgtgtccaggaa
caggaggggaaagcccggaacaaggctcagctagaccaggagatacaggggctgaggaat
gctctcgcaggtgcagagaaggagatctctaagctgaagagtcttcagagtgaaacaaag
atggaggtggaacacgctgacattctagaactcaacactgtcatcgggacgttgagaaag
gagaagcggaatctacaggagaggcttgccagggccgaggagagagtggagtcagacagc
ctcgatggatgtgagtcctccccatctgccacagagcagctatcagggctgagggcagag
ctggagaagagcgagcagtcgttgagcgagatccaggaggaacgagagaccctcctcaac
gaactggaagaactggaccgacagaaccagcaggctacacagcatgtcatctcagtgaag
gagcagctctctgttcagctgaaggaatctgaagctgttgtggctcggctccaatcagag
ctcagtaccgccgccgaccagagggtggcgctgcagcaagagctaaaggcccagcaggag
aaactgagccacagtgccttcactctcaacgacctacacatgggcaagcagcagctggag
gacaccgttaaggagctgagaaacaaacttggacgggcaacagagatgggcaaagaggca
cgcagggagacccaggatttccagagaaccatacaggagagggaagagcagctgtcggct
gcccgggcagagctgtgtgaggctggggagagagggagagaatccggggggtccatagag
cagctggaggagctcaggagagaactggcagagatgaggagctcccaggagaagatgatg
tcagaagactatgagatgaagatggagaagcagaggctgaagatggaggctgagcaggcc
caggggaggatagaggagctggccaggcaggtcagggaggttcaggctgctctcaccagg
accgtcctggagaaggacactcgtatccaggctctgaagctggagaagagccagctggaa
ggggaactgggccagacagagaagggcctacaggagcagaccaggcagtaccagcagacc
atcgaggagctgaccgctgcccgctccatggacgcctcggcactacagacggagcatgag
cggaccgtgaggctgaaccaggagaaggatctggagatatcccagcttaaaagagacgtg
gagcagatgtcctccgaccacagagacaccaacgagatgctgtccatcaccgtggccgga
cagaaacagctctccgacctcctccaggagaaggactccttcacggagagcctgagagcc
aacatggccgccacccagagggagctggaggccggggtccaggcagccacccaggaggct
gagaccctgagaggagctctggaggagaaggacaagcagctgggaggcatgaaggaagac
aacagccacctgaaggaggagatcgatcgcctcagggaccagcagaacagaccccagccc
tccggcctgtccgagccacgcaccctggacatcatcacagaactggagaatgagatcagc
cagctgaagagcaccagagacgggctggaggaggagggccactccctgaagaggagagtg
gaggagcagcggtgtcacctcctctcctcccagcagtctctcctggcgcagcagaatgag
ttggagcaggcccaccaacgccacgagcagagcagagagaactacgataggctgatccac
gccaaggacgaggagattgggcgcctgcagctggaagtcgatcacctcggccacacccac
tcctcccaggaacaggaagtggtcatcctccaacaggaagacaagacccagtcgtccctg
aataacggagagaacgacaacgagaaacatgacctgtcaaaggtggagataaaccgtctg
gtgcagggcatcaaggagaaggagactgaaatcagccagctgaatgagaacaacctgaac
ctgaccagacagctggcccaactggtggtctccagagaggagattgggaaactctcccag
atgctcttgcagaaggacctggagatccaggcactgcatgctagagtctccctggggggc
cacagccaggacgtgatgttcctccagcagcaactgcaggcttacgccgtggagagagag
caggtgctggcggtgctgaatgagaagacgagggagaacagtcagctgaggggggactac
cagcgcatcatggacattgtggcagggaaggaagctgtgctcctcaaggtccagcaggag
aaccagaggctgtccaccatgtctgacccctcaggcagccaggagatgttcagagagacc
atccagaacctgtcccggatcatcagagagaaggacattgagatcgacgcgctgacccag
aagtgccagaccctggtgtcggtgctgcaggcaggagactctggaggcgtcagctccaac
cagtttgaagagctgctgcaggacagggacacattgaaacaacaggtgaagaagatggag
gagtggaagatgcaggtgatcaccacggtaaagaacatgcagcatgaatctggacagctg
gtagaggagctccacaagctacagggacaggtggatgcagacaacgactgcacctcgact
ctctccgtggactacagccgtctgatccacagctatgagcagaaggagaggaagctcggc
agtctcagtcacgaactagcccacgtccaacagaccatcagccagctgagcagtactaaa
gatgtcctcctggggaaactggacagtgtggcgcagagtccccaagtcaccccactgtct
gctgccctgacgtctactgcccagcatcctgctgcagtggaacctcccagacaccaggtg
gcagcacctgcaacaccagggaaccaggaaggactgagacaggagttggagtctctgaga
gccctcctgtctgagagggagactatgatcaggaccttgcaggagaataaccaccgcctg
tgtaactcagcccaggtgtcagacagcgagcagcgaggccaggccgaggaggccagacag
gtcaaagagagactggacgttctgcagcgctctgtcagggagaaagacctgctcatcaag
actaaaggagatcaactcacccaggtgagtgagagcctgaggaaccgtgagagcgacaac
gaggtgttaaaacaagccgtgaccaacctgaaggagcgagctcttatcctggagatggat
accaggaagctgaaggatgagaacgaggctgtggcccagcggagccgggagaaggagtca
gagttcagagccctgcaggagaccaacatgcaggtgtccctcctcatgagggagaaggag
tttgagaggagcgccatgtcggagaaggcagccgccatggagaagatgctcaaggacaga
gaacagggcaacagccagaagtctggagagctcaaccagctcctgaacgagctgaggtcc
atgcaggagaaagctgtagccttccagcaggagagagaccaggtcatgctggctctcaaa
cagaaacagatggagaccacagccgtacagacagagctgcagcatgtgaaggacagagag
cagcggttgaagttggagctggaccgactacgtaaccacctgctggagatagaggagtcc
tacacacgggaggtcctcgccgcggaggacagggaggcggagctacgcaagagagtcacg
ctattggacgacagactggccacttcctccagtcaggtggagagcaccagccaccaggcg
tctctccaggtggagtctctccaggagcagctgagtgggacggtgaggcagagagacgag
gcctcgactcagctcagagcagcacgggaccaggtcaaccagtacgccgtgtccctgtcc
aacctccagatggtgctcgagcagttccagcaagaagagaaagccatgtattcgtcagag
cttgataaatacaagagggagaaggatgagtggagaagaaaagcacttaaactggaggac
aaagcctcagcacttcagatcaacctagatgaggctaatgctgctctggactcagcctcc
agactcactgaccagctggacctaaaggaagaacagctagaagagctcaaaaaacaagtt
gatgtgaggcaggagatgttggaagagtctcaggacaagttgatgaacctgctgaatagc
acagagggacaagtagaccaggctctgatgcggaacctgttcatgggatacttccacacc
ccgaaacccaaacgctccgaggtgctgaggctcatgggtagtgtcctgggactggacaag
gatgaggtcaaccagctgctggaggaggagggaggccatggtgtcggcggctgggtgtcc
ggctggttgggaggcagagctgtacagagtgtccccaacacaccacagagacctggagca
ggacaggggggcttcaacaactcgttctctgagatgtttgtaaagttcctggaggtggag
tctaggcccgcgctccctgcccccagacttcctgtttatgacatcaaacctctcagtgcc
ccgcctcctgggaggaccaccagctcagcctgggctcaacaaccagaaggaggggcggca
gccggcaggggacagagagcagccggggagtccaaccctttcctggctccccgctctgcg
gccgtaccgctgatgcatcatgggagcggtagttccagtgcttcgggaggacaccaccac
ctcctaatgaaacccatctcagacaacctgcctaccttcacccccgtgcccgtctccgct
gagagcggcgggcaggtgctcaaagacttactcaagcagtga
DBGET
integrated database retrieval system
