Oncorhynchus masou masou (cherry salmon): 135525479
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Entry
135525479 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135525479
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135525479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135525479
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135525479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135525479
NCBI-ProteinID:
XP_064809219
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All DBs
Position
32:complement(4468221..4476705)
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AA seq
327 aa
AA seq
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MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPP
VRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALDK
LDGTDLNGRKLKLSEDRNSRHSRSRSRGSRSYSRSRSRSRSPRSKSPSRSRSSHRSRSPR
SASRTPEKKPSSGGGGGGRAAHRSTSRSPSRSKSRSRTPPARSRSRTPPPRSRSPAPRSR
TPPPRSRSPAPARKPSRSRSPSVESQH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgagtgtttatcggtcgtttgagcccgcatgctcgtgagcgggacgtg
gagaagttcttcaaaggttatggaaggatccgggaagtaaatttgaagaacggattcggc
tttgtggagtttgacgaccacagagacgctgatgatgcagtttacgagctgaatggcaag
gaactctgtagtgaaagggtgactatagagcatgcccgctccagaagagggaggggtggt
ggacccgggatggggggcggaggaggaggacgtttctcccctcgtttcagcagctaccgc
caggggtctggtgatcgccgcggtggaggtggaggcggctccagtaggtatggtcctccg
gtgcgcactgagcacagaatcatcgtggagaacctgtcgtcacgcatcagttggcaggac
ctgaaagatctcatgaggaaagttggagaggtcacctttgtggatgcccaccgaaccaac
aagaatgaaggggtggtggagtttgcatcacacagtgatatgaagaacgctcttgataag
ctggatggaacagacttgaatggacggaagctgaagctgtctgaggatcgcaatagccgt
cacagcaggagtcgttcccgtgggtcccgcagctactcccggtcccgtagccggtcccgg
tcccctcgctccaagtcccccagccgcagcaggagcagtcatcgctccaggagccctcgc
tctgccagccgtactccggagaagaagccttcctcaggaggaggaggagggggcagggct
gcacatcgctccacttcacgttccccctcccgttccaaatcccgttcccgtacccctccc
gcacgctctcgttcccgtacccctcccccgcgttcccgctcccctgccccccgttcccgt
acccctcccccgcgctcccgttctcctgccccggcccggaagccgtcccggtctcggtcc
ccctcggtggagagccagcactga
DBGET
integrated database retrieval system
