Oncorhynchus masou masou (cherry salmon): 135525618
Help
Entry
135525618 CDS
T10723
Symbol
pals1a
Name
(RefSeq) LOW QUALITY PROTEIN: protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135525618 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135525618 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
PDZ domain-containing proteins
MAGUK family proteins
135525618 (pals1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
PDZ_2
SH3_1
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
135525618
NCBI-ProteinID:
XP_064809419
LinkDB
All DBs
Position
32:14281703..14336901
Genome browser
AA seq
708 aa
AA seq
DB search
MQKSHLIVLPPANHLQTXTHGGGGAGEGARVIMITTSYMNGHMTESDGRGGVEANQEEPQ
QWHREMAVDCPGDLGARTLPVRRSAQLERIRQHQEDRRRKEEEGRNRQELDLTASIRLKK
LSQNPKVGIDNPTFDPIEGPGGPLGLPPNLGAPTLLELEELLMSLKQVQHCLSDGQSQED
VELVLQLVQKTDFQKAFNIHNAVAQHMNRPSPPFPHTDRAQGLAHEVQSMVHNSQHKEGL
ELNTLLSSPHVQAVLLAHDCVAEQEMQLEPLTPDPCEALTQWGGETVKIVRMEKARDIPL
GATVRNDMDSVVISRIVKGGAAERSGLLHEGDEVLEINGVEIRGKDVNEVFDILAEMHGT
LTFILIPSSQNKPPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDP
NWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKK
LLYNVKQNDDNDSEEILTYEEMALYHQPANRKRPIALIGPPNCGQNDLRQRLLSSQPDRF
GGAVPHTTRNRRDVEVSGRDYHFVSRQAFDMDATAGKFIESGEFEKNLYGTSTDSVRQLI
NMGKICLLCLHTQSLKTLRSSDLKPYIIFIAPPSQERLRALLTKESKNPKPEELRDIIEK
AREMEQNFGHLFDAAIVNTDQDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatcacacctcatagtgcttcccccagccaaccacttgcaaacanncacacac
ggaggaggaggagcaggagaaggagcaagggtgataatgataaccacatcctatatgaac
ggtcacatgactgagtcagacggaagaggaggagttgaggccaaccaggaggagccccag
cagtggcacagggagatggcggtggactgcccgggggacctgggtgcccgtaccctgcct
gtgaggcgctctgcccagctggagaggatccgtcagcaccaggaagaccggaggaggaag
gaggaagagggcaggaacagacaggagctggatctgactgcctccatacggctcaagaag
ctgtctcagaaccccaaggtgggcatcgataaccccaccttcgaccccatcgagggccct
ggagggccactgggactgccacccaacctgggggcccccactctactggagttggaggag
ctgctgatgtccctgaagcaggtgcagcactgcctgtctgatggccagagccaggaggac
gtggagctggtgctgcagctggtccagaagactgacttccagaaggccttcaacatccac
aacgctgtggcccagcacatgaacaggcccagcccgcccttcccacacacagaccgcgct
cagggcctggcacacgaggtccagtctatggttcataacagccaacacaaggagggtttg
gagctcaacactctgctctcctcaccacatgtccaggcggtgcttctggcccatgactgt
gttgcggagcaggagatgcagctggagcccctgacccctgacccctgtgaggctctcacc
cagtggggaggggagactgtcaagatagtccgcatggagaaggccagggacatcccactg
ggtgcgacagtgcgtaacgacatggacagcgtggtaataagccgcatcgtgaagggcggt
gcggcagagcgcagcgggctgctgcatgaaggagacgaggttctggagatcaacggagtg
gagatcagagggaaggacgtcaacgaggtcttcgacatcctggccgaaatgcacggaacc
ctgaccttcatccttatccccagctcacagaacaaacccccgcccatcaaagagactgtg
gtccatgtgaaggctcactttgactacgacccgtctgatgacccctacgtgccgtgtagg
gaactgggcctgtgcttccagaagggagacatcctccacatcattagccaggacgacccc
aactggtggcaggcctacagggacggagacgaggacaaccagcccctggccgggctagta
ccaggcaagagcttccagcagcagagagaggccatgaagcagaccatagaagaggataaa
gagccagagaagtcaggaaagctgtggtgtgctaagaagaacaagaagaagaggaagaag
ctcctttacaacgtcaagcagaatgatgacaacgacagtgaggagatcctgacctatgaa
gagatggcgctctaccaccagccagccaatcgaaagcgacccatcgcactgattggtcct
cccaactgtgggcagaatgacttgagacagagactgctgtccagccagccagacagattt
gggggagcagtcccacacacgacgcggaacaggcgtgatgtagaggtgagtgggagagac
taccactttgtctcccgccaggcctttgacatggacgccactgcggggaaattcattgag
tcaggagagtttgagaagaacctgtacggaaccagcaccgactctgtccgccaactcatc
aacatgggcaagatctgcctgctctgtctgcacacacagtcgttgaagactctgcgtagc
tcggatctaaagccttacattatcttcatcgctcctccctcccaagaacggttgcgagcc
ctcctgaccaaagagagcaagaacccaaagccagaggagctgcgtgacatcatcgagaag
gcccgtgagatggaacagaactttggccacctgtttgatgcagccattgtgaacacagac
caggacaaggcctatcaggagctgctgaggctgatcaacaaactggacacagagccacaa
tgggtcccctcctcctggctacgctaa
DBGET
integrated database retrieval system
