Oncorhynchus masou masou (cherry salmon): 135525623
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Entry
135525623 CDS
T10723
Name
(RefSeq) endoribonuclease Dicer-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135525623
microRNA pathway
RISC loading complex
135525623
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GFIT
Other DBs
NCBI-GeneID:
135525623
NCBI-ProteinID:
XP_064809425
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Position
32:14600749..14669086
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AA seq
2177 aa
AA seq
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MAGLQLVTPASNPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGDLVEQGKRTVFLVNAASSVIQQAASVRTHSDLQVGEYMCVEKT
SSWSREKWSQEMIENQVLVMTCHIFLHVLKSGVLPLWKLNLVVFDECHLAITDHPYREIM
KLCEGCPCSPRILGLTASILNGKCDPSELEQKIQNLERILRSNAETATDLVVLDRYASQP
REVVLDCGPYLDKSGLSEHLLSELDEALHFLNDCNIPVPREDRDPTFISKQVLSDCRAVL
LVLGPWCADKVAGIMVRELQKYIKHEQEEINRKFLLFTDTILRKVHALCEELFSPASLDL
KFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNEDNYVSWSDSEDEDEDEEVEVKEKP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLAESERTKTFEEDLKTYKAIEKILRNKCSKAAGVGDFEVEPVQDDDNI
LPPYVLRSEEGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTKELKDGRYQSTLYLP
INSPLRVPVAGPIMNCARLAEKAVALLCCENLHKKGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYPVPEQSYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISMELQKAGFTLSAVQLDLITRLH
QYIFSHILRLEKPALEFNPTQADSAYCVLPLNVVEDSNTLDLDFKFMEDIEKSEARVGIP
TTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSRFPSPEYQTFAE
YYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGAQTLPSDFR
YPNLDFGWKKSIDSKSFICLRDEDEEEEEEEEEEDSGDDNCKQQGQTVAPDPGLAAAVSQ
QPFSDCHVSSRPEGCDIHQRPENDRQEDEEPQQPDSASCTSILANGTAPIANDNGDHGDH
SHLHDGRDNCQCLPAGSGLPLENEKEVSTTQTTTSVLPVQPSLSIENQNLTPTPPQPKPG
TQPPPPHPQAGTQPPPPQPGTQSPPPPPPQPQPGTQPQPPQPQPGTQPPPPQPGTHPPAP
PPSQPQPGTQSLPPQPQPGTQPLPPQPQPGTQPLPPQPQPGTQPPPPQPGTHPPAPPPSQ
PQPGTQSLPPQPQPGTQPLPPQPQPQPGTQSPPPQPQPGTQLSPPQPQPGTQLSPPQPQP
GTQPPPPQPQPGTQLPPPQPQPSDECRPGRTSELREGDGHHVNQATSDCCSPATMTGPAG
TAPITTTPLPDPSEPLETQEITTSSSVVGDTLGPCSKTLGPNPGLILQALTLSNASDGFN
LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPCRMVV
SIFDPPVNWLPPGYVVNQDKSSEDKWDEDEAKEELLANGSAGEELCVEELGEEVLEEDED
LMWKEPKDEVNVEDDLEYYQEHIKFIDNMLIGSGAFGKKISLGTFPPAPATPGPSPSPSA
RSSSPAAEPSYGEWKPPKKPGPVPTPHYPSEPSGSGSADEFDYSSWDAMCYLDPSKAGEE
DDFVVGFWNPSEENCGAELGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQ
MFLCSLGLKVLPVERRRLKEKGGVIEVVNLDLQYGWLKIPPRCIFDHPDAELTLNHLISG
FENFERKISYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR
QHSPGVLTDLRSALVNNTIFASLAVQYDFHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM
DSELRRSEEDEAKEEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKF
SANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAA
RRALRSLKANQPQVPNN
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactccagctggtcacccccgcctccaatcccatggggcctttctttggtctc
ccgtggcaacaggaggccatccacgacaacatctacacgcctaggaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactattgtctgcttaaatactggctcagggaag
acttttattgcagtactcctaactaaagagctctcccaccaaatccggggagatttagtc
gaacaagggaagaggacagttttcctggtgaatgcagcatcgtctgtgattcagcaagca
gctagtgttaggacccactctgatctccaggttggagaatacatgtgtgtggagaagacc
tcatcatggtccagggaaaagtggagccaagaaatgattgaaaatcaggtgctcgttatg
acgtgccatatcttcctgcatgtgctgaagagtggagtgctgccactatggaaactcaac
ctggtggtgtttgatgagtgtcacctggcaatcacggaccatccctaccgggagataatg
aagctatgcgagggctgtccgtgcagccctcggatcctgggcctcactgcatcaattttg
aatggtaaatgtgacccgtctgaactggaacagaagatccagaacttggagcggatcctg
cggagcaatgcagagacggctactgaccttgttgtccttgacagatatgcctcccagccc
agagaggtggtactggactgtggaccctacctggacaagagcggcctctcagagcatcta
ctgagcgagctggacgaggctctccacttcctcaacgactgcaacatacctgtgcctcga
gaggacagagaccccaccttcatatccaaacaggtgctgagtgactgtcgggcggtgctg
ctggtgctggggccgtggtgtgccgacaaggtggctggcatcatggtgagggagctgcag
aagtacataaaacacgaacaggaagagattaacaggaagttcctgctcttcaccgacacc
atcctgaggaaggtccacgccctgtgtgaggaactcttctccccggcctctctggacctg
aagtttgtgaccccgaaggtcatccgtctcctggagatcctccatgagtacaagcccttt
gagaggcaacagtttgagagtgtggagtggtacaacaaccgcaacgaggacaactacgtg
tcgtggagtgactcggaagacgaagacgaggatgaggaggtggaggtgaaggagaaaccc
gaggctaacttcccctcgccgttcaccaacatcctgtgtgggatcatcttcgttgagagg
cgctacacggccgtcgtcctcaaccggctaataaaggaagcagggaaacaggacccggag
ttggcctacatcagcagtaacttcatcacgggacacagcatcggaaagaaccagccacgc
aacaagcagatggaggtggagttcaggaaacaggaagaggttctgcgtaagttccgtgcc
cacgagaccaacctgctcatagcgaccagcatcgtggaggaaggggtagatattcccaag
tgtaacctggtggtgaggtttgacctgcccactgagtacaggtcctacgttcagtctaaa
ggccgagccagagcccctgtctccaactacatcatgctggctgaaagtgagaggaccaag
accttcgaggaagacctgaagacctacaaggccatagagaagatcctgagaaacaagtgt
tccaaggcagcgggggtcggtgactttgaggtggaaccggtgcaggatgatgacaacatc
ctgcctccctacgtgctccgctctgaggaaggagggccccgcgtcaccatcaacacggct
atcggacacatcaacagatactgtgcccgtctgcccagtgacccgtttacccacctggca
cctaagtgtaagaccaaggagctgaaggatgggcgctaccagtcaaccctctacttgccc
atcaattcccctctacgggtgcccgtcgctgggccaatcatgaactgtgcacgactggca
gagaaggcagtggcactactttgttgtgaaaatcttcacaaaaaaggtgagttggatgac
cacttgatgcctgtggggaaagagaccgtgaagtatgaggaggagctggatctccatgac
gaggaggagaccagtgttccaggtagaccaggatccaccaagaggaggcagtgctaccct
aaagctataccagagtgtcttcgggacagttaccctgtaccggagcagtcttactacctg
tatgtgattggcatggtcctcaccacccctctgcccgacgaactcaacttccgccgcagg
aagctctaccctccagaggacactaccaggtgcttcggcatcctgactgccaaacctata
cctcggatcccccactttcctgtgtacacgcggtctggtgaggtgaccatctccatggag
ctccagaaggctgggttcactctgagtgctgtccagctggacctgatcaccagactacac
cagtacatcttctctcacatccttcgcctggagaaacctgctttagagttcaatcccacg
caagctgactcggcctactgcgttctacctctcaatgttgttgaggattccaacactcta
gatttggattttaaattcatggaggacatagagaagtccgaggctcgtgttggcattcct
accacccagtacaccaagcagaaccccttcaccttcaaactggaagactaccaggacgct
gtcatcattccacgctatcgtaactttgaccagcctcaccgtttctacgtggctgacgtt
tacacagacctcacacctctcagcaggttcccgtcaccggagtaccagacgtttgctgag
tactacaaaaccaagtacaacctggacctgtccaacgtaaaccagccactactggacgta
gaccatacctcctcacgcctgaacctgttaacccctcgtcacctgaaccagaaggggaaa
gccctgcccctcagcagtgcagagaagaggaaggccaagtgggagagtctacagaacaaa
cagatcctggtcccagagctgtgtgccatccaccccatcccagcctctctgtggaggaag
gctgtgtgtctccccagtatcctgtatcgccttcactgcctgctcacagccgaggagctg
agggcccagacagccagcgacgctggagtaggagcccagaccctgccctctgacttcagg
tatccaaacctggactttggatggaagaagtccatcgacagcaagtcattcatctgtctg
cgtgatgaggatgaggaagaggaggaggaggaggaggaagaggacagcggtgacgataac
tgtaaacagcagggccagactgtagcccctgaccctggacttgctgctgctgtttcccag
caaccctttagtgactgtcatgtctcttctcggcctgaggggtgcgacatccaccaacgc
cccgaaaatgacagacaagaggacgaggagccccagcagccagactccgcctcctgcact
agcatcctcgctaatggcactgcccccattgccaatgacaacggtgaccacggcgaccat
tcacaccttcacgacggacgtgacaactgccaatgtctcccggctggttctggtttgcca
ctggagaacgaaaaagaagtatcaacaacacaaaccactacctcagttcttcctgtgcag
ccctctcttagcatcgagaaccagaatctaaccccaacaccccctcagcccaagccaggg
acccagcctccaccccctcacccccaggcagggacccagcctccgccccctcagcccggg
acccagtctccacctcctccaccccctcagccccagccagggacccagcctcaaccccct
cagccccagccaggtacccagcctccaccccctcagcccgggacccatcctccagctcct
ccaccttctcagccccagccagggacccagtctctaccccctcagccccagccagggacc
cagcctctaccccctcagccccagccagggacccagcctctaccccctcagccccagcca
ggtacccagcctccaccccctcagcccgggacccatcctccagctcctccaccttctcag
ccccagccagggacccagtctctaccccctcagccccagccagggacccagcctctaccc
cctcagccccagccccagccagggacccaatctccaccccctcagccccagccagggacc
cagctttcaccccctcagccccagccagggacccagctttcaccccctcagccccagcca
gggacccagcctccaccccctcagccccagccagggacccagcttccacccccccagccc
cagcctagtgatgaatgtagaccagggaggacctcagagctccgtgagggcgacggacac
cacgtgaatcaagctacctcagactgctgcagcccagcaacgatgacgggtcccgccggc
acagctcccatcaccacaacacctttacctgacccctcagagcctctagagacccaggag
atcaccaccagcagctctgtagtgggggatacccttggcccctgctccaagaccctgggg
cccaaccctgggctcatccttcaggccctgaccctgtccaacgccagtgacggcttcaac
ctggagcgtctggagatgctgggagactccttcctgaagcacgccatcaccacctaccta
ttctgtacctaccccgatgcacacgagggacgactctcctacatgaggagcaagaaggtg
agcaactgtaacctgtatcgtctgggaaagaagaaaggtcttccttgcaggatggtggtg
tccatctttgacccaccggtcaactggctgcctcctggctacgtggtcaaccaggacaag
agcagcgaagacaaatgggacgaggatgaggccaaagaggagctcctggccaacggtagt
gctggagaggagttgtgtgtggaggaactaggggaggaggttctggaggaggatgaagat
ctgatgtggaaggagcctaaagacgaggtcaacgtggaggacgacctggagtactaccag
gagcacatcaagttcatcgacaacatgctcattggctccggtgccttcggcaagaagatt
tccctcggtaccttcccccctgcccccgccacccctggcccaagtcccagcccctccgcc
cggtcctcctcccctgcagccgagcccagctacggggagtggaaaccccccaagaaacct
ggcccggtccccaccccccactacccctcagagcctagcggtagtggctcagcagatgag
tttgactacagctcgtgggatgccatgtgttacctggaccctagcaaggcaggggaggag
gatgatttcgtggtgggtttctggaacccgtcggaggagaactgtggggcggagttgggg
aaacagtctatctcctatgacttgcacacagaacaatgcatcgctgacaagagcatcgct
gactgtgtggaggcattgctgggctgctacctcaccagctgtggggagagggctgctcag
atgttcctctgctcactgggactcaaggtgttaccggttgagaggaggaggctgaaggag
aagggcggggtcatagaggttgtgaaccttgacctccagtatggctggctgaagatccca
ccccgctgcatatttgaccacccggatgccgagctcaccctcaaccacctcatctctggc
tttgagaactttgagaggaagatcagctacaccttccagaacaaggcctacctgctgcaa
gccttcacacacgcctcctaccattacaacaccattactgattgttaccagcgactagag
tttcttggcgatgcaattttagactacctcataacgaagcacctttatgaagacccgcgc
caacactctcctggcgtgctcacagacctgcgctcggcgttggtcaacaacactatcttc
gcctccctggccgtccagtatgacttccacaagtacttcaaggctgtgtcgcccgagctg
tttcatgtcatcgacgactttgtgcaattccagctggagaagaacgaaatgcaaggcatg
gactctgagcttcggcgctcagaggaagacgaggcgaaagaggaggatattgaggtcccc
aaggcaatgggagacatatttgagtcactagccggagcaatttacatggatagcagaatg
tcactggagacagtgtggcaagtgtattatccaatgatgaggccacttatagagaaattc
tctgctaatgtccctcgctctccggtgcgggagctattggagatggagcctgagacagcc
aagttcagccctgcggagcggacgtacgacgggaaggtccgtgtgacagtggaggtcgtg
ggcaagggcaagttcaaaggcgtgggccgcagctaccggattgccaagtctgctgccgcg
cgccgggccctgcgtagcctcaaagccaaccaacctcaggtcccaaacaactga
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integrated database retrieval system
