Oncorhynchus masou masou (cherry salmon): 135525688
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Entry
135525688 CDS
T10723
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
omm03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135525688 (pnn)
Spliceosome [BR:
omm03041
]
Complex C
Other components
EJC/TREX
135525688 (pnn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135525688
NCBI-ProteinID:
XP_064809540
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Position
32:complement(20770795..20777240)
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AA seq
674 aa
AA seq
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MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIPGVGGRGRGINLL
RRGLSDIGGGPGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVV
ATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQKL
EVQAEQERKKVEGERRELFDERRAKQTELKLLEQKVELAHLQEEWNEHNTKIVKYIRTKT
KPPIFYLPGRMCSATQKLFDESQKKMNVMFEERCEAFAEYLNKMEARPRRQSLRDNALGK
DLKKEEQEEGKPTGQVVKATGNRFNVEMEDEATLEGDVGVKRKEDRKKKPGEKVREQAPK
KGEDKENGQDIRIIEFREVEEQMEVTAVVREAEWQVGDQDKEDSLVIGGAEVDNEKEAEQ
QQQVKVEKENKQLQNQDPTAVSDDQEKSFEMQPTEDEEPHTEVSIPLLSEPNPSLEVSDG
ASIAPEVQIPLLEAGTEPLTTEQSQEADQGAMKQTVDVQSAQYDAAPKELEPLIGESSRG
RGKSKDKKGDGGGGSSSSSSSSSGSSSSGSSGSSSGSSSRSSSSSGSSSSSSSSRSRSRG
RKDRKHRRKPAERKKGGGDKSQKLSMASGRESKGSKVKGSKSDRKRTSSEGCRSGKMPSR
SDRDRKSDRKEKRR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtaggttctttgcaagcccagcttgagaaagctaaagagagtttgaaa
aatgtagacgataatatccgtaaattaactggccgggatcctaatgaattgagacctggc
caagctagaaggccaaccatcccaggcgttggaggtaggggacgaggaatcaacttgttg
agacgtggactctccgacattggtggaggacctggaggacccccagctaaacagagggac
attgaaggggcccttctgaggctggccggtgaccagcgagcgaggagagattcacgccat
gacagtgacgctgaggatgatgacgatgtcaagaagccagcgttgcagtcatcagtagta
gctacctccaaggagcgtacgcgtcgagacctgattcaggatcagaccatggatgagagg
ggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacgttacagaaatttaag
caggaatctaatgtggcaacagataggcaaaagaaacgcattgagattgaacagaaattg
gaagttcaagctgaacaagaacgcaagaaagtagagggcgaaagacgagagctctttgat
gagaggcgtgccaagcagacagagctaaaactgttggaacagaaagtggagcttgctcac
ttgcaagaggagtggaatgagcacaatacaaaaattgtgaagtacatccgcacaaagacc
aagccacccatattctatctgcctgggaggatgtgctcagccactcagaagctctttgat
gagtcgcagaaaaaaatgaatgttatgtttgaggagagatgcgaggcgtttgccgagtat
ctgaataagatggaggctcggcctcgccgccagtctctgagggacaacgctctgggtaag
gacctgaagaaagaagaacaagaggagggtaagcccacgggtcaggtagtcaaagcgaca
ggtaatcggtttaatgtggagatggaggacgaggcaacactagagggggatgtgggtgta
aagcgtaaggaggacagaaagaaaaagccaggagagaaagtcagggagcaggcacctaag
aagggggaggataaggaaaatggtcaagacattagaataatagagttcagagaggtggaa
gagcagatggaggttactgcagtggtgagggaggctgaatggcaggtcggggatcaggat
aaggaggatagtttggtgataggtggggcagaggtagataatgagaaggaagcagaacag
cagcaacaggttaaggtagaaaaggaaaataagcagcttcagaatcaggaccccacagct
gtgtcagacgaccaggagaaaagctttgaaatgcaaccaactgaagatgaagagccacat
acagaagtgtccatacccctgctctcagagcccaaccctagtctggaagtctctgatgga
gcatctatagcccctgaggttcagatccccctgctggaggctggaacagagcctctcaca
acagagcagagccaagaggctgatcaaggtgcaatgaagcagactgttgatgtccagtct
gcccagtatgatgctgcccccaaggagctggagcctctgattggtgaatcaagcagggga
cgtggaaagtcaaaggacaagaagggagatggtggtggtggcagcagtagctcctcaagt
agctcttctggctcctcatccagcgggagctccggctcctctagtggctcctccagcagg
agcagctcctccagcggcagctcctcttccagctcctctagcaggagccgcagccggggg
aggaaggacaggaagcacaggaggaagccggccgagaggaagaagggaggtggtgacaag
agccagaagttgtccatggccagtggtcgtgaatccaaaggttccaaagtgaagggctct
aagtctgacaggaagaggaccagctctgagggctgccggtcagggaagatgccctctcgc
agtgaccgggatcgcaagtctgataggaaggaaaaaagacgttga
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