Oncorhynchus masou masou (cherry salmon): 135525789
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Entry
135525789 CDS
T10723
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135525789 (brf1a)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
135525789 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
135525789
NCBI-ProteinID:
XP_064809722
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All DBs
Position
32:25888763..25950480
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AA seq
671 aa
AA seq
DB search
MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGLYTGVGRESRAQTLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
RLTRGRRVAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDEECDPPSFIAGQRK
KRMKLLEEELEKKIDDVQGEIHEYQDEIEMELEQSRPKLRGMYASCVKHGPQEEEDDEIS
LPDGEEREDEELKAVAQHLNKELCDQVISGEEDGEGQEERPPRRGPSLASLLGPMPTAAS
LGLPESISKCIGEEKENDEDAENGELDLSGIDDDEIELYLLNDKEVKIKTELWLKQNEDY
LKEQKEKEERIAKEKELGIYKDKKPKSSKKRAPIHASTADEAIEKMLEQKKISTKINYDI
LKELNVKPCASPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSSLGKRLRPFIS
AHPHKKLALDQIAIPLPVASEVSPHSVLVESGPVVYDDVADEEEEDEEEPCVSAMELLGG
NEYGCDDDDGF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagagtgtgtaagaactgtgggggcacagacatcgatgtggaccaggccaga
ggcgatgcggtgtgcgtgggctgtggctcggtcctggaggacaacattatcgtgtctgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctctggaaggaaccccacttttggggaagggctctatacgggcgttggaagggag
tcccgggcccagaccctgcagaacgggagacgtcagatcaacacactgggtcaccagctg
cagctgaaccagcactgcctggacacggccttcaacttctacaagatggccgtgtgtaaa
cgcctgacacggggtcgaagggtggcccacgtggtggccgcatgcctctacctggtctgc
aggacggaaggaacacctcacatgctgcttgacctcagtgacctcctgcaggtaaatgtt
tacgtcctgggtagaaccttcctggtcctggccagggagctctgcatcaatgcccccgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggagtttggagagaagaac
catgaggtgtccatgacagcactgcgactgctgcagaggatgaaaagggactggatgcac
acgggacggagaccctcaggactgtgtggcgcagccctgttggtcgctgctcgcatgcac
gagttccgccgtaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
cgaaagagattgaatgagtttgaggacacacccaccagccagctgaccattgaggaattt
atgaaagtggatcttgacgaggagtgtgacccgccctctttcatcgctggccagaggaag
aaaagaatgaagctgcttgaggaagaattggagaagaagattgatgatgttcaaggtgaa
atccatgagtaccaagatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctgtgtaaaacacggcccccaggaggaagaggacgatgaaatatct
cttcctgatggggaggagagggaggacgaggagctaaaggctgtggcccagcacctcaat
aaggagctgtgtgaccaggtgatctctggagaggaggatggagaggggcaggaggagaga
cctccacgcagaggcccatcactggcctccctcctggggcccatgcccaccgcagccagc
ctcggcctcccagagtctatcagcaagtgcatcggagaggagaaggagaacgatgaggat
gctgaaaatggagagctggacttgagtggtattgatgatgatgagattgagctgtatctt
ctgaatgacaaagaggtgaaaatcaagactgagctttggctgaaacagaatgaagactac
ttgaaagagcagaaagaaaaggaagagcggatagcgaaagagaaggagctggggatttac
aaggacaagaagcccaagagctccaagaagcgggctccgatccatgccagcacagccgac
gaggccatagagaagatgctggagcagaagaagatctccactaagatcaactacgatatc
ctgaaggaactgaatgtcaagccatgcgccagtccagcccgccagacagcagagtctccg
aaaggagccacccctggagcccagaggctgactggacgataccgcaaacccaccaatgtc
cctctgagcctgggcacaccactcagcagcctgggcaagaggttacggcccttcatatca
gcacacccccataagaagctggctctagaccagatagccatccccctgccagtggcctct
gaggtgtcgcctcactctgtgctggtcgagagtgggcctgtggtctatgacgatgtggca
gatgaggaagaggaggatgaggaggagccctgcgtcagcgccatggagctgctgggaggc
aacgagtatggatgtgatgatgatgatggtttctag
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