Oncorhynchus masou masou (cherry salmon): 135525800
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Entry
135525800 CDS
T10723
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137
Mitophagy - animal
omm04140
Autophagy - animal
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135525800
04137 Mitophagy - animal
135525800
04148 Efferocytosis
135525800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135525800
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135525800
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
135525800
NCBI-ProteinID:
XP_064809742
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Position
32:complement(26528772..26569018)
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AA seq
753 aa
AA seq
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MNTVVSEKKSRVSSERRKEKSRDAARYRRGKESEVFYELAQELPLPHSVTSNLDKASIMR
LAISYLHMRKLLSTDKAVEKEQEESEMDSQLNGSYLKALEGFLMVLSKDGDMIYLSENVN
KCLGLAQFDLTGLSVFEYTHPCDHEELREILVHRTGTSKKSKGPNTERSFFLRMKCTLTS
RGRTVNVKSSTWKVLHCSGHVRVHEAPTEQSPIGHKELPVSYLVLVCDPIPHPSNIEAPL
DTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDADYLTKTHHNLFVK
GQVSTGQYRMLAKIGGFVWVETQATVIYNNKNSQPQCVVSVNFVLSGIEEEKMVLSLEQT
EDMRSVKKELVEEEEDEGSEAEVSPVLLKEEKVDVIKLFTQAMEAQPLASLYDRLKEEPE
ALTLLAPAAGDTIISLDFSSPGQYPALPGALDSDILLKEVPLYNDVMLPSTSDKLALPHS
MLPPNEQPLIPSASVDTKPDSPLNFCFPMDSDISAALKLDLVERLFAIDTEPKTPFTSQG
MEDLDMLAPYIPMDDDFQLRTLSPEEPPSCGPAQPLESSPLCSPLNLTQDVHSYTDSPFS
APRSRTASPAPELAASPYPASLLTMREPQMNREMSLRTLATQNSQRKRKLSLSQAVGIVN
GALLQDPPGPGKQLKVSELGSSEAPSNRTILLLPTDLTSCLLGISSEGSGSPFTLPQLTR
YDCEVNAPVVGRQHLLQGEDLLCALDQVNCVNA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgttgtctcagaaaagaaaagcagggtgagctcggagcggaggaaggagaag
tcccgggatgcagcgcgataccggagggggaaggagtcggaggtgttctacgagctggcc
caggagctgcccctgccccacagtgtcacctccaaccttgacaaggcttctatcatgaga
ctggccatcagctacctgcatatgaggaaactgctgagcacagataaggcagtagagaag
gagcaggaggagagtgagatggactcccagctgaatggctcctatctgaaggctctggag
ggcttcctcatggtgctgtctaaagacggggacatgatctatctctctgaaaatgtcaac
aagtgcttgggtctggcacagtttgacctgacaggacttagtgtgtttgagtacacacac
ccctgtgaccacgaggagctaagggagatcctggtacacagaacagggacctctaaaaag
tccaagggaccaaacacagagcgcagcttcttcctgcggatgaaatgtaccctcaccagc
agggggcgcactgtcaatgtcaaatcatccacctggaaggttctccactgctcaggccat
gtgcgagtccatgaagccccaactgagcagagccccattgggcacaaggagctgcccgtc
tcctacctggtgctagtctgtgaccccatcccccacccctccaacatcgaggcgccattg
gacaccaagaccttcctcagccgccacacactggacatgaagttcacctattgtgacgag
aggatcactgagctgatgggctatgatccagaggacctgttaaatcgctctgtgtatgag
tactatcatgccttggatgcagactacctcactaagacccatcacaacttgtttgtcaag
ggccaggtgagcacaggccagtaccgcatgctggctaagataggtggctttgtgtgggtg
gagactcaggcaactgttatctacaacaacaagaactcccagccccagtgtgttgtctct
gtcaactttgtgctcagtggcattgaggaggagaagatggtgctgtctctggagcagact
gaggacatgaggtctgtaaagaaggagctggtggaggaggaagaggacgagggctcagag
gcagaggtgtcccctgtgctcctgaaggaggagaaggtggatgtgattaagctgttcacc
caggcaatggaggcccagccgctggccagcctgtatgacagactgaaggaggaaccagag
gccctcacccttctggccccggccgcaggagacaccatcatctccctggacttcagcagc
cccggtcagtaccctgccctgcctggagctttagactctgacatcctgctgaaggaggtg
cctctctacaacgatgtgatgctgccctccaccagtgacaagctggccctgcctcactct
atgctgccacccaatgagcagcccctgatccccagcgcctcagtggacaccaagcctgac
agcccgctgaacttctgttttccaatggactctgacatcagtgctgcgctgaaactggac
ctggtggaaagactgtttgccatcgacacagaacccaagacacctttcacctcacagggc
atggaggacctggatatgttggctccatacatccccatggatgatgacttccagctgcgc
accctgtccccagaggagcccccatcgtgtggcccagcccagcccctggagagctctcct
ctgtgctctcctctgaacctcacccaggatgtccacagctacactgattccccctttagt
gccccaagaagccggacagcttccccagccccggagctggcagcgagcccttaccctgcc
tccttactcaccatgagggagcctcagatgaacagagagatgtccctcaggacactggcc
acccagaactcacagcgcaagagaaagttgtctctgtctcaggctgtcggaatagtaaat
ggggcattgctccaggatcctcctgggccaggtaaacagctcaaggtgtctgagctgggc
agctctgaggctccctccaacaggaccatactgctcctacctacagacctgacaagctgc
ctgcttggcatctcctcggagggcagcggctcacccttcacccttccacagctgacccgg
tatgactgtgaggttaatgcccccgtggtgggtcgccagcacctgctgcagggcgaggat
ctgctgtgtgccctggaccaagtcaactgcgtcaacgcttag
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