Oncorhynchus masou masou (cherry salmon): 135525805
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Entry
135525805 CDS
T10723
Name
(RefSeq) homeobox protein SIX4-like
KO
K15615
homeobox protein SIX4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135525805
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
135525805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
135525805
NCBI-ProteinID:
XP_064809758
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All DBs
Position
32:26737861..26744915
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AA seq
678 aa
AA seq
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MSSSSGEVTISNNIKKENVKTDKRDCIKLLALETAELSMERATSNTDAVHSELLVSAASS
LAFSPEQVACVCEALQQGGNVDRLSRFLWSLPQSDLLRGNESILKAQALVAFHQARYQEL
YSVLENHNFSPFNHSSLQDLWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGEE
TVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEAQ
SKSESDGNHSTEDESSKGQGELSPRPLSNSSDGMMTHGVLPLQTGSLDSGVIIQQIGDIK
IPPGSSSEVLFNGNLVTSNPSTVFHNGGSSYLQAPSNILFNGLNLGIQPLAFNSLRPSGG
VLMGGSGVDMQMQAGQEKGLGSSSVDYASYSGCVNGAEVKLEGVYSMAAQNGSSSVLTFS
SSSGALQLGGYSLVHVPSGVSNGEGTSLLNSNLGLPPLQLPSDSSSLSQGTIQVNNVAVS
SSSEDSYHHQHHQDKLAMAPMHPSTVLYSMGNAGQTSIKKEPLEGGGGGGVYSYHHGLHL
DPSGQLSYSSDPLTSEEVPSSRGSSSDVTTVSSSSPEPEVYTSLTVSTPLMAQTDPNGHQ
LQPGEYLRGHNPQPVPSSHLLGPGMNNSYMSVSESKVDANGGGVNEMVRVMCGEMEPGEE
KELAKLQTVQMDEDMVDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttcaggagaagtcacaatttcaaataacatcaagaaggaaaatgtgaag
acggacaaacgagattgcatcaagcttctagcgctggaaaccgcggagttgtctatggag
cgcgcaacttcgaacactgatgcagtccacagtgaacttctggtgagcgcggcttcctcg
ctggcattctccccggagcaagtggcgtgtgtctgcgaggctttgcagcagggaggcaat
gtggaccggctgtccaggtttttatggtccttaccacagagtgacctgcttcgtggcaac
gaaagcatcctgaaagcccaagctcttgtcgcttttcatcaagctcggtaccaggagctc
tacagtgttttggagaaccacaacttcagtccattcaatcactcctcgctgcaagacctc
tggtataaggcacggtacaccgaggcagagaaagcgcgggggagacccctgggcgctgtg
gataaatatcgcctgcggagaaagtacccactaccccggactatctgggacggggaagag
acagtatactgcttcaaagagaggtcccgcaacgcgctgaaggatctatacaagcagaat
agatatccctctccagccgagaaaagaaacctcgctaaaatcacgggactctccttgacg
caggtcagcaactggttcaaaaacaggagacagagggacagaaacccgtccgaagcacaa
tcaaaaagtgaatctgatggcaaccacagcacagaggatgagtctagtaaagggcagggg
gagctctctccacgccccctctccaattcatctgacgggatgatgacccatggggtcctc
cccctgcagacagggtctctggacagtggtgtaatcatccaacagattggagacataaag
ataccccctggatccagcagtgaggtgctcttcaatggaaacctagtgacaagtaacccc
tccactgtcttccataacggtggctcgtcttacctccaggcccccagcaacattctgttc
aatgggctcaacctgggcatccagcccttggccttcaactccctgcggccctctgggggg
gtcttgatggggggctctggtgtggacatgcagatgcaggcaggccaggagaaggggctg
ggcagctccagtgtggactacgcctcctattctggctgtgtaaacggagcagaggtgaag
ctggagggggtttacagcatggcagctcaaaacggcagctcgtctgtcctcacgttcagc
tcgtcttcaggggcgctccagctgggcggttacagtctggtccacgtgcccagcggcgta
tccaacggcgaagggacgtcactgctcaacagcaacttgggtcttcctcctctgcagctc
ccctctgactcctcatcactctcacaaggtacaatccaagtgaacaatgtagcagtcagt
tcttctagtgaggactcctaccaccaccagcaccatcaggacaagctggccatggccccc
atgcaccccagcacggtgctctacagcatgggcaacgctggacagacctccattaagaag
gagcccctggagggtggtgggggtggaggggtgtactcctaccaccatggccttcacctg
gaccccagtgggcagctcagctactcctcagacccactaacctcagaggaggtcccctcc
agccggggctcctcctctgacgtaaccaccgtcagctcctccagtccagagcctgaggtc
tacaccagcctcaccgtcagcacccctctgatggcccaaacagaccctaacggacaccaa
ctccagcctggggagtacctcaggggccacaacccacaacctgtcccctcctcacacctt
ctgggccctggcatgaacaacagctacatgtctgtgtcggagagtaaggtggacgctaat
ggcggtggggtgaatgagatggtgcgggtcatgtgtggggaaatggagccgggggaggag
aaggagctggccaaattacagacagtgcagatggacgaggacatggttgacgtttaa
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