Oncorhynchus masou masou (cherry salmon): 135525869
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Entry
135525869 CDS
T10723
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135525869 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135525869 (mlh3)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135525869 (mlh3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135525869
NCBI-ProteinID:
XP_064809882
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Position
32:28868542..28874406
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AA seq
1242 aa
AA seq
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MIKCLSKEVQGKLRSGIAIFSLQQCVEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDNLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEINHSHAQFELSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSSSRQNDSPGTPPATRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHTEGVTLECNVGNTLASELVHRRQIEDSD
KMKSVYQTCDGFESEQGDRVGKLRDKEVLTGFEQEQEYNTTNPQCRPSSVDTDQDLQYDS
ITDSSVTDSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTKEENLKMSIEEGTEMKD
NAREHVYLSRCTVRAPCTLTQGIQSEMGSIKQTLPQPQDIELNPGGHRKIFLSHPYIHSS
LPSHKCLSHQSRKGLALESREKLATKRKWPMVEDPGHLHVYNRESKDLSTGISSKISTFM
SCQKLALYKEVGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTEHLVMNAKAVLP
YLEADQERDVTESRLDLMKDHKSPLTFSMFTKLKSLSDRSSEISLATKLSHLKHQRTEVA
TSAFVHPPETTSNEDICPQDTVENNAILDINNGEQHNNTGRNRDFIPGCSTNPLPDEKEA
NNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKKG
IEYRCYPFQMDLVLPFLPKSKSGRVLSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPMV
GVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACSE
TDGNLLVLVDQHAAHERVRLENLVADSYEDDPETPGERRLCSSIVAPPLEVSVTEEELRL
LRSCRPSLRGLGLEIQFSQIGDPQVLVGKVPMCFTEKESNELRRGRRSIIKPIVEEYLQE
QIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDRLSKEECCSLVGALSSCQLPFQCA
HGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKAWELYGNR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgtcaaaagaagttcagggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtgttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtcggaaaccgatacttcacaagcaaatgcagttct
ttagaggacctagataatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacgactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttctctc
attcacccctctgtctctttcacactgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaactaagcggttatgtagga
cgggaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagttcaagtcgg
cagaatgacagcccaggtacacctcctgccactaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggcggtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagacgga
gttaaggactccattggcaaaggtgtccaaacacacacggagggtgttaccctggaatgt
aatgttggaaatacccttgcatctgaacttgttcatcgacggcagatagaagactctgac
aagatgaaaagtgtttatcagacatgtgatggatttgaatcagagcagggtgacagagta
ggaaaactaagggacaaggaggtccttacgggttttgaacaggaacaagagtataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaagatctacagtatgattca
attacagattcatcagttacggactcagagtcttacaaggaagttacgaaagagaatgaa
agcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtcttatc
tttaagacaaaggaagaaaatctgaaaatgagtatagaagaaggaacagagatgaaggat
aatgcaagagagcatgtatacctctcaagatgcactgtgagagcaccatgtactctcact
cagggaatccagtcagagatgggctctatcaaacagacactacctcaaccacaggacata
gaactgaatccaggtggacacagaaaaatctttctatcacatccatacattcatagcagt
ttaccctctcacaaatgtctctcccaccagagtagaaaagggctagcgttagaatctaga
gagaaacttgcaacaaaacgaaaatggcctatggtggaggacccaggccatcttcacgtt
tacaacagagaaagtaaggacctttccactggcatctcttcaaagatttctacgttcatg
tcatgtcaaaagctggctttatataaagaggttggatctctggacaggttcagaagaata
tacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattatttagca
attgatgccacagcttcccagaccgaacacttggttatgaatgccaaggctgttttgccc
tatcttgaagcggatcaagaaagggatgttacagagtcacgtctggatctgatgaaagac
cacaaaagcccattaacattctccatgttcaccaaactcaaatctctctcagatcggagc
agtgaaatatctttggctaccaaactctctcatttaaaacaccaaaggacagaggttgca
accagtgcatttgtacatcctccagagaccacttcaaatgaggatatatgtccccaggac
actgtagaaaacaatgctattctagacatcaataatggagaacaacacaataacactggc
cggaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaagcg
aacaatgtcacagcatcatgtgattggctgcatcactatgacgacgctgtggggaagctg
gtttacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagagaca
caagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatttccaaaaaaggg
attgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaatcc
aaatcagggagagttcttagttcagggcctgacaatagagatgacattcaggactctaat
tcgctgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatggtt
ggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatcctc
tttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtggat
aagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgcggcctgcagcgaa
actgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgtctt
gagaatctagttgcagattcgtacgaggatgatccagagacaccgggagagagacggcta
tgctcatccattgtagccccaccactggaggtcagcgtgacagaggaggagctgaggctg
ctcaggtcctgccggccatccttgaggggcctgggtctggagatacagttctcgcagata
ggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagcaat
gaactccgccgggggagacgttctatcatcaagcccatagtggaggagtaccttcaagag
cagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggtactt
aaagtcctcgcctcccttgcatgtcatggtgcaatcaaattcaatgaccgcctcagtaag
gaggagtgttgcagcctggtaggcgctctatcttcatgccagctgcccttccagtgtgcc
catggccgcccatccatcgccccgctggtagacgtccttcacttgaatgaccaagaggaa
ccacctagaccaaacctcagaaaactgagaagaatgtacaaagcctgggaactttatgga
aatagataa
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