Oncorhynchus masou masou (cherry salmon): 135525975
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Entry
135525975 CDS
T10723
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
omm03083
Polycomb repressive complex
omm04110
Cell cycle
omm04330
Notch signaling pathway
omm04350
TGF-beta signaling pathway
Brite
Enzymes [BR:
omm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135525975
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
135525975
HDAC complexes
Sin3A-HDAC complex
135525975
BRAF-HDAC complex
135525975
REST complex
135525975
SHIP complex
135525975
MiDAC complex
135525975
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
135525975
Heterochromatin formation proteins
Other heterochromatin formation proteins
135525975
Chromatin remodeling factors
NuRD complex
135525975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135525975
NCBI-ProteinID:
XP_064810036
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All DBs
Position
32:33384393..33396357
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AA seq
497 aa
AA seq
DB search
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSAIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACDEE
FSDSEDEAEGQGGGRRNAASFKKAKRTKTEEDKEGEEKKAGDEKKADEKKEVKEEKVPDE
EKMDTSTKGPKEESKTP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagttctcaaggaacaaagaaaaaagtttgctactattatgatggtgatgtt
gggaattactactatggccagggccaccccatgaagccacaccgtatccgcatgacacac
aacctcttgctgaactatggtctctacagaaagatggagatataccgacctcacaaagcc
aatggcgaggagatgaccaagtaccacagtgacgactacatcaagttcttgcgttccatt
cggccagacaacatgtcagagtacagcaaacagatgcagagatttaacgttggagaggat
tgccctgtgtttgatggcttgtttgagttctgccagctttcaacaggaggctctgttgct
ggagctgtgaagctgaataaacagcagacagacattgccattaactgggccggaggactc
catcacgccaagaagtctgaggcgtcaggtttctgctatgtgaatgacattgtgctcgcc
attctggagttactgaaataccaccagagagtcctgtacatagacattgatatccaccat
ggagatggagtggaggaggcgttttacaccacagacagggtcatgaccgtgtccttccac
aagtatggagagtacttccccggcaccggagacctgagggatattggcgctgggaagggc
aagtactatgctgtgaattatcctctgagagatggtatagacgacgagtcttacgaagcc
atattcaaacctatcatggctaaggtgatggagatgtaccagcctagtgcagtggttctt
cagtgtggagccgactccctctcaggagacaggcttggctgctttaacctcaccatcaaa
ggccatgctaagtgtgtggagtacatgaagagcttcaacctgcccctgctgatgctgggt
ggtggaggctacaccatccggaacgtggcccgctgctggacctatgagacagccgtggcc
ctggacagcgccatacccaatgagcttccatacaatgattactttgagtactttgggccg
gacttcaaactgcacatcagcccctctaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcagcgtctgtttgagaacctgcgcatgctgccccatgccccgggtgtt
cagatgcaggccatcccagaagatgctgtgcaggaggacagtggagacgaggaggaggaa
gaccctaacaaacgcatctccatccgtgcccacgataagaggatagcatgtgacgaggag
ttctccgactctgaggacgaggctgagggtcaagggggcggacgcagaaatgcagccagc
ttcaagaaggccaagaggaccaagactgaggaagacaaagagggtgaggagaagaaagca
ggtgacgaaaagaaagctgatgagaagaaagaagttaaagaagaaaaggtgccagatgag
gagaaaatggacacctccacaaaggggccaaaagaggagtccaagacaccgtga
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