Oncorhynchus masou masou (cherry salmon): 135526003
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Entry
135526003 CDS
T10723
Name
(RefSeq) claudin-20-like isoform X1
KO
K06087
claudin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03272
Virion - Hepatitis viruses
omm04382
Cornified envelope formation
omm04514
Cell adhesion molecule (CAM) interaction
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
135526003
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135526003
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135526003
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135526003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omm03037
]
135526003
04147 Exosome [BR:
omm04147
]
135526003
Cilium and associated proteins [BR:
omm03037
]
Other cilia and associated proteins
Stereociliary proteins
135526003
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
135526003
Exosomal proteins of colorectal cancer cells
135526003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
135526003
NCBI-ProteinID:
XP_064810083
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All DBs
Position
32:34531870..34533823
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AA seq
334 aa
AA seq
DB search
MASLRLKSSSPPPHPVFLCVYRNHCEQPDASKRSSAPAESIGAGTEELSRRLLPALAPES
STAVWGEEPRCLAGAGWMVTGGVGGHGRRRRMASTGMQIFAFVLALLGIMGAMMATLLPN
WKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVLSLPAYLQTARTTMVLSCV
MAAMGLCLASLGLKCTRWGGGRRAKRHAAIASGGCFIAAGFLCLVPASWFTKEVITNFLD
RSVHESNKFEPGGAVYVAFLSAGFLFVGGSIFCVSCSGKRPGHQDMILLPPPDKLLLQQQ
QHLLQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctaaggctgaaatcctcctcgccccctcctcaccccgtgtttttgtgtgtt
tacagaaatcactgcgaacaacctgacgcgtcaaaaaggagctctgcaccagccgagtcc
attggagccggcactgaggaactgagtcgtcggctgctgccagctctagcaccagaatcc
tctacagccgtctggggtgaggagccgaggtgcctggctggggctgggtggatggtaact
ggaggagtagggggccacggcagaaggaggagaatggcatccacaggcatgcagatcttt
gccttcgtcctggcgctgctgggcatcatgggggccatgatggctacgctgctgcccaat
tggaaggtgagcgccgatgtaggctccaacatcatcacggccatctcccagatgcagggg
ctgtggatggactgcacctggtacagcaccggcatgttcagctgcaccttgaagtactcg
gtgctgtcgctgcccgcctacctgcagactgcccgcaccaccatggtgctgtcctgtgtg
atggctgccatgggcctgtgcctggcatccctggggctcaaatgtactcgctgggggggc
ggccggcgcgccaagaggcacgcggccatcgccagcgggggctgcttcatcgccgccggc
ttcctgtgcctggtgcctgcttcctggttcaccaaagaggtcatcactaacttcctggac
cgcagcgtgcacgagagcaataagtttgagcccgggggcgccgtgtacgtggccttcctg
tcggcaggcttcctctttgtgggggggtccatcttctgcgtgtcgtgctcggggaagagg
cccggccaccaggacatgatcttgctgccgccccctgataaactcttactgcagcagcaa
cagcacctcctacagcaacagcagcaggaccagctccagcaccagtactgctccctctcc
ccactagacaataaaacaggctacagtctgcaggactatgtgtag
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