Oncorhynchus masou masou (cherry salmon): 135526150
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Entry
135526150 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135526150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135526150
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135526150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
DSE1_N
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
ASA1
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_ACSF4
CFAP251_N
PAN2_N
Beta-prop_NOL10_N
SGL
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
135526150
NCBI-ProteinID:
XP_064810354
LinkDB
All DBs
Position
32:complement(48554270..48609170)
Genome browser
AA seq
643 aa
AA seq
DB search
MADGGCNSSLRLPCVFSPKSRQYLASFAQDGRLRIWNTDSKILHQEYVPSAHLSATCTCI
VWGPCRIAKEGPLRKKRKSEAGHVEDLADLLALGTVAGSIIIYSAVKGTLHCTLDGGHNK
GVNCVEWHPEDSLLYSGSDDSYIVEWDLQTSKTRCKWKADRASVTSLCVSPDGKLLLSAG
QTIKMWDLKTKEVYRKFTGHSTAVTNMRFATTRXPDSNGLYFLSGAAHDRLISVWQVQKD
SNDMNSVVSFTLTADPQHIDLFTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSGLEDIPVPVPLLAAALTADTRSLLLAYGSYLQPVMERLDVNTAERHVCLTRNVH
TTLTIAMETTVSKVKTPVVNAKSKVLVPGLPGHQAPVKAALGSEKRKKGTDTKEMSIEER
LGEIDLSLEKGGVKETPSLQTDNFAVLLVQGLESKDANILNNVFQTRKDNLIKKTVSRLP
IPAVLPLVEELTKRMQGHPYTAVLMVRWLKAVLMQHTSYLSSLPDLVSQLGVLYHMIESR
VKMFHKLTKLHGKLYLLMTQVVTGDSGVTDVDHKAKLVYEDASSDEDKASGDEGLPDEDS
DNWEEDGIEEDKHREEETEEGMRTESKANGDSDKEPGNESEEE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtggatgcaattcttcgttgcgtctaccctgcgttttctcgccaaaatca
cgccaatacctagcttcatttgcccaagatggcaggctccgtatatggaacacagatagt
aaaatacttcatcaagaatacgtgccttcagcccacttgagtgccacttgtacctgcata
gtttggggaccatgccgaatcgccaaggagggacctctgaggaagaagaggaaatcagag
gcagggcatgtggaggatttggcggatctgttggctctgggaacggtggcgggcagcatt
ataatttacagcgcagtgaaggggacactgcactgcacactggatggaggtcacaataag
ggagtgaactgtgttgagtggcaccccgaggacagcctgctctacagcggctcagatgac
tcctacatcgtagagtgggacctgcagacaagcaagacccgctgtaagtggaaggcggac
cgtgcgtcagtgaccagtctgtgcgtgagtcctgatggcaaactgctgctctcagcggga
cagaccatcaagatgtgggacctcaagaccaaggaggtgtaccggaagttcacaggtcac
tccacagccgtgacgaacatgcgcttcgccaccacgcgtnccccggacagcaatggcctc
tacttcctgtccggggcggcccacgacagactcatcagcgtgtggcaagtccagaaggac
agcaatgacatgaactcggtggtgtccttcaccctgacggccgacccccagcacattgac
ctcttcacttccaacagcaaggaagaggcggtgaggctggcggttgtgtgtaaggatggg
cagcttcatctctttgagcactttctgaacgggccttgtaagaagccgctgtccccttcc
tgtacagtccagatgtctgggcttgaggacatccccgtgcccgttcctctgttggccgcg
gccctcactgcggacacacgcagcctcctgcttgcctatggcagctacctgcagcccgtc
atggagagattggatgtgaacacagcagagagacacgtctgcctaacccgcaatgtccac
accaccctcaccatcgccatggaaacgactgtttccaaggtgaaaactccagtagttaac
gccaagagcaaagttcttgtccctggtcttcccggtcaccaagcgccagtcaaagcagct
ttgggatccgagaagaggaaaaagggcacagacaccaaagagatgtccatagaggagcga
ctgggagagatcgacttgtcacttgagaagggcggagttaaggaaaccccctctctgcag
acggacaacttcgcggtgctactggtgcagggtctggagagcaaggacgccaacatcctc
aataatgtgtttcaaacccggaaggataacttaataaagaaaaccgtttcccggttaccc
atccctgccgtcttgccattggtggaagagctcaccaagagaatgcaagggcatccatac
acggcagtgctgatggtgcgatggctcaaggctgttctcatgcagcacacctcctacctg
tcctcgttgccagacctggtgtctcagctgggagtgttgtaccacatgattgagagcaga
gtcaaaatgttccacaaactgaccaagctgcacggcaagctctatctgctcatgacacag
gtggtgacaggtgacagtggtgtcacagacgtggaccataaggccaagcttgtctacgag
gacgcgtcctctgatgaagacaaggcttcaggcgatgaaggtcttccagacgaagattct
gataactgggaggaggatggcatagaggaagacaagcatagagaagaagagactgaggaa
ggcatgaggacggaatccaaagctaacggtgattccgacaaggaaccgggaaacgagagc
gaggaagaatga
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