Oncorhynchus masou masou (cherry salmon): 135526314
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Entry
135526314 CDS
T10723
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135526314 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135526314 (cstf2)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135526314 (cstf2)
U7-dependent histone pre-mRNA processing factors
135526314 (cstf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
135526314
NCBI-ProteinID:
XP_064810649
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Position
32:58104797..58135634
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AA seq
527 aa
AA seq
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MANLAAAVVAAAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRET
GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIES
PYGDNIIPDEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAFALL
QAQVVMRIVDPEIALKMLHRQTPVQPLVPNSQAGPVPVANQPIPPPNAPVSQSQPMLGMH
MNGAPQMMQPPPIGGGPGPMPGQGLVGPPGNLQHSPVGSSGQAAIERPQGPGGIPPRGLL
GDGPNDPRGGTLLSVTGEVIEPSRGGAFIGAPPPHQGPPMHMNQIVGGPPSDMRPPHDMR
GPPMGEPRGMMGEPRGPPMGEPRGMMGEPRGPPMGEPRGMMGEPRGPPMMEPRGLPMETR
GRDPRAVDTRGPVSGQRVPMAQGMQGPPPHSMNPNAPPTARPGPGVPQSGGSFSPGQSQV
TSQDHEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagcagctgctgttgttgctgccgctggtagagatcccgctgttgaccgt
tcattgcgctctgtctttgtgggaaacattccatatgaggccacagaggagcaactgaaa
gacattttttcagaagtcgggcttgttgtcagctttaggttagtgtatgatagggagacc
ggcaagccaaaaggatatggcttctgtgagtatcaagaccaggagaccgccctcagtgcc
atgcggaacctgaacggaagagagttcagtggccgagctctccgtgtcgacaatgctgct
agtgagaagaataaagaagagctcaagagtttggggacaggggcccctatcattgagtct
ccctacggggacaacataataccagatgaggctccagagtctataagcagagctgtggcc
agtctgcccccagagcagatgtttgagctcatgaaacagatgaagctgtgtgtgcaaaac
agtccccaggaggccaggaacatgctgttgcagaacccccagctggcctttgccctgctc
caggcccaggtggtcatgaggatcgtagaccctgagatcgccttgaaaatgcttcaccgt
caaaccccagtgcagccattggttcccaacagtcaagctggaccagtgccagtggccaac
cagcctattccaccgcccaacgctccagtctcccagtcacagccaatgctgggcatgcac
atgaacggagccccccagatgatgcagcccccgcccataggtggaggacctgggcccatg
ccagggcagggactagtgggaccaccaggaaacctccagcactctcccgtaggatcgtct
gggcaagctgctatcgagcggcctcaaggaccaggtggtatcccccccagaggcctgctt
ggcgacggccccaacgacccccgaggaggaaccctgctctcagtcacaggagaggtcatc
gaacccagtcggggaggagccttcattggcgcccccccaccacaccaggggccccccatg
cacatgaaccagatagttggcgggcctccttcggacatgaggccacctcacgacatgaga
ggaccccccatgggtgaacccagaggcatgatgggagagccccggggaccccccatgggt
gaacccaggggcatgatgggagagccccggggaccccccatgggtgaacccaggggcatg
atgggagagccccgtggaccacccatgatggagcccaggggactccccatggagacaaga
ggtcgtgaccccagagcggtggacacccgtggaccagtgtcaggccagagggttcccatg
gcccaaggaatgcagggtcccccccctcactctatgaatcctaatgcccctccaactgcc
agaccgggtcctggtgtaccacagtctggaggtagcttcagcccagggcaaagccaggtg
acctcacaggaccatgagaaggccgccttgatcatgcaggtgctgcagctgaccccagaa
cagattgccatgctgcccccagagcagaggcagagcatcctcatcctcaaagagcagatc
cagaagaccgccggggcgccctaa
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