Oncorhynchus masou masou (cherry salmon): 135526323
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Entry
135526323 CDS
T10723
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04518
Integrin signaling
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
135526323
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135526323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135526323
Membrane trafficking [BR:
omm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135526323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_9
CH
SH3_1
RhoGEF67_u1
PH
CENP-Q
HAUS-augmin3
IcsB_M
Motif
Other DBs
NCBI-GeneID:
135526323
NCBI-ProteinID:
XP_064810674
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All DBs
Position
32:complement(58652559..58686658)
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AA seq
774 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGSVPKYCQDP
RNEADCIVNIKEFLRGCTSLKVEGFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
QSGTSAPSQSTSSHTLSSTKSKSLRRPSKPVEMSENGGGGLLLVKARFQFKQNNEDELSF
NKGDLIGVSRQEEGGWWEGTLNGKTGWFPSNYVREVKPCDKPVSPKATQLTKNYYSVVVQ
DIQEHEREFVKELQTVLSSYLRPLLASDKLSVTDSGILGANLEEILTFQQGLVLALEECT
KVPESQQRVAACYLNLIGQIRMLYLSYCSSHPSAVCVLTDHSEELGTFMESQGASTPGIL
TLTTSLSKPFMRLDKYPVLLQELERHVEEAHPDYSDILKATVAFKSLVTQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSQVHMQNGTNEEKEERYLMMFPSVLVMLSASPRM
SGFIYQGRLPLTGSTVSRQTDDTENGHYAFDITGSMFDRVTVICSNPQELQDWLDHLNTY
TKGGSPVGTIIRNEGGKPLSMVGTPTHQSHLPIFITPSQANRGPLEPPKTTKPWSLSCLR
PAPPLKPSAALGYKERMSYILKDSGKSPRPIKKFLPKRKTERKPSDDEFLLRKSTAALEE
DAQILKVIESYCTGASLHQNNTAVRKDSVPQVLLPEEEKMMVEEMKNNGQTIIEEKSLVD
AVYALKDEVHELKKESKWIKQCLEDEQKSRKELERVVRKLAKQKNDCAWEDGDH
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagagcagacggttacgtggctgatatcattaggggtacttaattcaccc
aagaagaacatagctgacccagaggaatttctgaaaacatctctgaaagatggggtcgtc
ctatgcaaacttatggagcggctcgtccccggctctgttccaaagtactgtcaggatccg
agaaacgaagccgactgcatcgttaatatcaaggagtttttgagaggatgtacatccttg
aaagtagagggatttgaaccagagtgcctgtacactggggagaactttaacaaagtgctg
accactctgctgggagtcaactttgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacatccgctcctagtcagtccacctcttcccacacactctcctcaaccaag
tccaagtccttgcgcagaccatccaaaccagtggagatgtcggagaacggcgggggcggg
ctgctgctggtgaaggcgcgctttcaattcaagcagaataacgaggatgagctgtccttc
aacaagggagacctgatcggtgtgtcacgccaggaggagggcggctggtgggagggcacg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aagcctgtgtctcctaaagccactcaacttaccaagaactactacagtgtggtggtgcaa
gacatccaggagcatgagcgggagtttgtcaaggagctgcagacagtcttgagctcttac
ctacgacctctactggcaagcgacaagctgagtgttacagacagtggcattctgggcgct
aacctggaggagatcctcaccttccagcagggcctggttctggctctggaggagtgtacc
aaggttccagagagccagcagcgagtggctgcctgctacctcaacctgattggtcagatc
aggatgctgtacctgtcctactgctccagtcacccttcagctgtctgcgtactcactgac
cacagtgaggagctgggtacgtttatggagagccagggggccagtacgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtaccccgtcctgctg
caggagctggagagacacgtggaggaggctcacccggactacagtgacatcttgaaggca
acggtggcctttaagagcttggtgacccagtgtcaagacctgcggaagcgtaagaacctg
gaactacagatcctgtcagagccagtgagaggctgggagggagacggaatgaagtctctg
ggtcacgtggcctacatgtcccaggtgcacatgcagaacgggaccaatgaggagaaagag
gagcgctatctcatgatgtttcccagtgttctcgtcatgctgtctgctagtccgcggatg
agcggcttcatataccagggaaggctgccactgacgggctccacggtctccagacagaca
gacgacacagagaatggccactatgcctttgatatcacagggagcatgtttgatcgtgtc
acagtgatctgcagtaacccccaggaactgcaggactggctggaccatctcaatacctac
accaaaggcggaagccctgtgggcaccataatcaggaacgagggggggaaaccgctcagt
atggtgggcactcccactcaccagtcccacctgcccatcttcatcacccccagccaggcc
aaccggggaccactggaaccccccaagaccaccaaaccctggtccctgagctgcctgcgt
cctgccccgcccctcaagccctctgctgcactgggctacaaggagagaatgtcttatata
ttgaaggactccgggaaaagtccgaggcccattaagaagttcctcccgaaacgcaaaacg
gaacgaaaaccttccgacgatgagttcctcctgcggaaaagtacagctgctctggaggag
gatgcacagattctgaaggtgatcgagtcctactgcacaggggccagcctgcatcagaac
aacacggcggtgaggaaagattctgtccctcaggtcctgctgccggaggaagagaagatg
atggtggaagagatgaagaacaacggtcagaccatcatagaggagaagagtctggttgat
gcagtgtacgctttaaaggatgaggtccatgaattaaagaaggagagtaagtggatcaag
caatgtctggaggatgagcagaagtctcgtaaggagctggagagagtggtcaggaagctg
gccaagcagaagaacgactgtgcctgggaggatggagaccactga
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