Oncorhynchus masou masou (cherry salmon): 135526389
Help
Entry
135526389 CDS
T10723
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135526389
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135526389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135526389
NCBI-ProteinID:
XP_064810804
LinkDB
All DBs
Position
32:complement(61640372..61659364)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIVLFLLLCIADGVVSQIRYSVPEEAGHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFINEKIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKSLDREQQASHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NTPAGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVRSEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKIMDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVARDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELFSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIIAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSNETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSAGTDLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHHHQNHLHLSHHHATHANQAKLERKAFEALLSSTRAPYKPAYLTRKGVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttttgctgtgtatcgcggatggagtggtctcgcagatacgctac
tctgtgccggaggaggctggacacggcacgttcgtagggaatatcgccgaggacctggga
ctggacatgaccaaaatcgcttcacgccgcttccaggttgtgcccagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcatcaacgagaaaattgaccgggag
cagatctgcaagcagagtgccagctgtcttttacaccttgaagtgtttttggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgaaaccgacatcaccgtagagatctcggagagcgcagtccccggtacccggtttccc
ctagagagcgcattcgatccggacgtgggttccaatgcgctgcgcacatacgacatcacc
accaataactacttctacttggatgtgcagacgcagaccgacgggaacaaattcgcagaa
ctggtgctagagaagtcactggacagggagcagcaggcgtcccacaggtatgtgctgact
gcagtggacgggggccagccgccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccagtatactctgtgagtcttcaggag
aacacaccggcggggaccctcgttatccagctgaacgccacggacttagacgaggggcag
aatggggagatagtgtattcattcagcaaccacatctccagccgcgtcaaggacctgttc
gccatagacgcgcgcactggacgcatcgaggtgcgcagtgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatctcggacccaatgccgtggccgcgcac
tgtaaagttctggtgaaaataatggacgtaaatgataatgctcccgatatcacattcagc
acagtgaccgagtcggtgagtgaaagggcagccccgggcaccgttatagccctgctgagc
gtgactgacaaagatgctgaggaaaacggaaagattcacgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagatggaccccta
aatagagagaatgctgactcttattcagtgactgtagttgccagggatacagggacccct
tcccttgccaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtgtatgtgactgaaaacaatgtgccgggtgcttat
atccacgctgtgaccgctctggacccagatgttggacagaacgctctcattagttactcc
ataatggagtgcgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaagag
acgggctacctttacgcactcagatcattcgattacgagcagcttaaagacttcactttc
atggttcaggcgaaagatgcaggtagccctgagctcttctcgaacgccacggtcaaagta
atcatcgtggaccagaatgacaaccctccctccgttattgctcctcttggtaaaaatggc
actgctagagagcctctgccccgctccgccgagcctggctacctggtaacccgtatcatc
gccatggatgcagacgacggagagaacgcacggctctcctacagcatccagcgggggaac
gaaaacggcatgttccgcatggactggaggacaggagaattgcgcactgcccggcgcgtc
tccaccaagcgggacccaaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagtgtggtggag
gaccatcgggagaggggcaccgccaagtccaatgagacatcgctggacctcaccctcatc
ctcatcatcgccctgggctcagtctccttcatcttcctcctggctatgatcgtgctggcg
gtgcgctgccagaaggacaaaaagctcaacatctacacgtgcctcactagtgattgctgc
ctcgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tccgatataatgctggtgcagagcgccaacgtcaccggggccggtacagcccaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgactccggagtcggccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacaccagcgagcc
gagctcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgtaagctctaaagacagtggtcatggtgacagcgagcaaggcgacagtgaccat
gacgccaccaatcgaggtcactctgccggcactgatctcttctctaactgcacggaggag
tgcaaggcactgggacactccgaccgctgttggatgccctcctttgtgccctccgacggg
cgccaggcagcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagtcaagagcaaacgggcgataagtcattctccacctttggcaaa
gagacccccctcagccaccaccaccaaaaccacctccacctcagccaccaccatgccacc
cacgccaaccaagccaagttagagaggaaagcgtttgaggcacttctgtctagcacgcga
gcgccttacaaacctgcctatttgacgaggaaaggggtttgctag
DBGET
integrated database retrieval system
