Oncorhynchus masou masou (cherry salmon): 135526439
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Entry
135526439 CDS
T10723
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135526439
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135526439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135526439
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135526439
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
135526439
NCBI-ProteinID:
XP_064810881
LinkDB
All DBs
Position
32:complement(63282792..63324399)
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AA seq
2299 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLIEIVWPLLIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRNPTPGESPGVVGNFNESIISRLFSDAKKILLYSQNDR
NLDGFKGLIQALKTLQANTKGFKLKDFLHNNETLSTFLLRNASFSEHAVRQIIEADVNLE
KVLVKGFGVHLRDLCSSNGTRVEDFVTITDSKVSSLVQKMLCVSPGSWLNQAESHFLHNL
DFLKPIRKDVRTDPEAVQQVAKATDKLLESLGSLALELASMKSWRDLRNEIIFLTENATS
SPSHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNTTNGEEPISAYDNTSTP
YCNAMMRNMESSPVSRMIWQALKPLLMGKILYTPDTPATQKIIHEVNRTFQELGVLRELG
GMWEEIKPKVWTFMESSEHMDLVRTLLKNNGTGSFFTSQLAGSEWTVEDVSNFLTKHSQD
THPHGTTFTWREVFNETDQAIMSISRFMECVNLDKMEPVANEERMVNKSMALLDDRKFWA
GIVFPDIEANSSELPANVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDIIEHSIITAVTGVKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAI
IIKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVVLLKMGNLLPYSD
PGVIFLFLGSFAVVTIMQCFLISTMFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKIVASLLSPVAFGFGCEYFALFEEQGIGIQWNNLFNSPMEEDDFSLTTAIIMMYFDSFL
YMVMTWYIESVFPGQYGIPRPWYFLFSKSYWFGEGENRKTDFSQNKRRSCEAVCIEEEPA
HLKTGVFIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKSEIE
QILIDTGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDL
LLQYRLGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKG
PEPFLSSCRNSSSTVSLTKKEEDCPSESSSDAGLGSEHESEVATIETAQAASICESAFVP
PDVSLISSLIFKHVPAARIVENLGHELIYVLPYGAAKDGAFVELFKDMDNHLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPLRRRRRNHAFGGGNAFGGDHQSCLRPQID
DDNNEHNDSDADPESRETDFLSGSDGKGSYKVTGWSLKRQQFVALIWKRFLYAQRSRKGF
FAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEEQSLFISDDAPEDASTQRLLSA
LTEGPGFGTRCMEGQPIPDTPCTMGDEDWSIPEVPETLLELFRTGNWTMEEPSPACACSC
DGRKKMLPECPAGAGGLPPPQMKISETDTLQNLTNRNISDYLVKTYAEIIGKSLKNKIWV
NEFRYGGFSLGARSTNVLPAADEIDDAIARVRKIFELEKGAAADRFLESLSSFINGLDTK
NNVKIWFNNKGWHSMGAFLNVMNNGILRSNLPPGKDPSKFGIRAFNHPLNLTKEQLSQVA
LMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWTANFIWDM
CNYIVPATLVIIIFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAY
VVLTSVNILIGINGSISTFVMELFGDNEIGGINNILKNVLLIFPHFCLGRGLIDMVKNQA
MADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLFQYRFCIKPINLHTKLPP
VGEEDEDVARERQRIVNGLGHGDILELRQLTKVYKRKQKPVVDRLCVGIPPGECFGLLGV
NGAGKTTTFKMLTGDSMVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHL
EFYAVLRGVPEKEVCEVAEWGIRKLGLVKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVF
LDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGS
VQHLKNRFGDGYTIILRVAGADPDLPPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSL
AHIFSILAKNKDLLRIEDYSVSQTTLDQVFVNFAKDQSDDYHSKDNSVKRKEAVMDTTPL
SSRQAEEKLAEERLKESLV
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctcaactcagctgggcttgttgttgtggaagaactttacctacaggagaagg
caaacgctccaactgctgattgagatagtatggcccctgttgatcttcttcattttgata
tcagtgagactgaactaccctccgtacgaacaacatgaatgtcatttccccaacaaggcc
atgccctcggcgggcaccctgccctggatccaaggcatcatctgcaacgccaacaacccc
tgcttccgcaaccccactcctggagagtcccccggggtcgtgggcaacttcaacgagtcc
ataatctctcgtctgttctctgatgccaagaagatcctgctgtacagtcagaatgaccgg
aatctggatggctttaaaggcctcatccaagccctgaagacactacaggccaacaccaaa
ggattcaagctgaaggatttcctccacaacaatgagaccctgtccactttccttctgcga
aacgcttccttctcggaacacgccgtgcgccagatcattgaggccgacgtgaacttggaa
aaggtgctggtcaaaggcttcggtgtccacctgagggacttgtgcagcagcaacggcacc
agagtagaggactttgtgaccatcacagacagcaaggtgtccagtctggtccagaagatg
ctctgtgtgtccccaggctcctggctcaaccaggcagaaagccacttcctccacaacctg
gacttcctcaaacccatacggaaagatgtgaggactgaccctgaagccgtccagcaggtg
gccaaggctacagacaaactcctggagagcctgggctccctggccttagagctggccagc
atgaagagttggagagacctgcgtaacgagatcatcttcctcacagagaacgccacatcc
tcccccagccacatgtaccaggctgtgtcgcgcatcgtctgtggccatcccgagggtggc
ggactaaagatcaagtccctcaactggtatgaggacaacaactacaaggctctgttcggc
aaccacaacacaaccaacggggaggagcccatctctgcctatgacaacacatccactcca
tactgtaacgctatgatgaggaacatggagtccagccccgtgtccaggatgatctggcag
gccctgaagcctctgctcatgggcaagatcctgtacacccccgacaccccagccacacag
aagatcatccacgaggtgaacagaacattccaggagctgggggtcctcagagagctgggg
ggcatgtgggaggaaattaagcccaaggtctggaccttcatggagagcagcgaacacatg
gacctagtaaggaccctattgaagaacaatggcactggcagcttcttcacctcccaactg
gcgggctcagagtggactgtggaggacgtctccaacttcctgaccaaacattcgcaggac
acgcatccacacggtaccaccttcacctggagggaagtcttcaatgagacggaccaggcc
atcatgagcatatcccgcttcatggagtgtgtaaacctggataagatggagcccgtggcc
aatgaggaaaggatggtcaacaaatccatggcgctcctggacgataggaagttctgggcg
gggattgtgtttccagatattgaggccaacagctctgaactgccggccaacgtcaactac
aagatccgcatggacatcgataacgtggagcgcaccaacaagatcaaagacggatattgg
gaccctggtcctcgtgctgacccatttgaggacctgcgctacatctggggtggcttctct
tacctccaggacatcatcgagcacagcatcatcacagcagtaactggcgtcaaggagaag
acgggagtctacatccaacagatgccctacccctgctacgtggacgacatcttcctgcgg
gtgatgagtcgctccatgcccctcttcatgaccctggcctggatgtactctgtggccatc
atcatcaagagcgtggtgtacgagaaggaggcgcggctcaaggagaccatgaggatcatg
ggattggacaacggcatcctgtggttcagctggttcatcagtagcctcatccccctgcta
atttctgccggcctgctggttgtgctgctcaagatggggaacctgctgccctacagtgac
cccggcgtcatcttcctgttcctgggttcttttgccgtggtaaccatcatgcagtgcttc
ctcatcagcacaatgtttgcccgtgccaacttggcggcggcatgcgggggcatcatctac
ttcaccctctacctgccctacgtcctctgtgtggcctggcaggactatgtgggctttggg
gccaaaatagttgctagcctgctgtccccagtggcctttggctttggctgtgagtacttt
gccctgttcgaagagcagggcatcggcatccagtggaacaacctgttcaatagccccatg
gaggaggacgacttcagcctgaccactgccatcatcatgatgtacttcgactccttcctc
tacatggtgatgacctggtacatcgagtccgtcttccctggtcagtatggtattcccagg
ccctggtacttcctcttctccaagtcctactggtttggagaaggggaaaacaggaagact
gacttcagtcagaacaagagaaggagctgtgaagctgtctgtatagaggaagagccagcc
cacctgaaaactggtgtcttcatagagaacctagtcaaggtgtaccggcacgggaagaag
ctggctgtggatgggctgactctgggcttctacgaaggacagatcacctctttcttgggc
cacaacggagcagggaaaaccaccactatgtcgattctaacgggactgtttccgcctacc
tctggcactgcttacatcatgggaaaagacatccgatcggagctgagtgctattcgacag
agtctgggcgtttgtccacagcacaacgttctcttcagcatgctgaccgttgaggagcac
atctggttctatgctcgtctgaagggtctatctgaggaacaggtgaagtctgagatcgaa
cagatcctgatagatactggcctgccgcacaaacgcacttccaggaccagcacactgtcc
ggagggatgcagaggaagctctctgtggctctggcctttgtcggggggtcaaaggttgtg
attctggacgagcccactgccggggtcgacccctacgcccgcaggggcatctgggacctc
ttgctccaatatcgtctaggtcgtaccatcatcctctccacccaccacatggacgaggcg
gacatcttgggcgaccgcattgccatcatctcccacggcaagctgtgctgcgtgggctcc
tccctcttcttgaagaaccagctgggtacaggctactacctcaccctggtcaagaagggc
ccagaacctttcctcagctcctgccgcaactcctccagtaccgtctccttaactaagaag
gaggaggattgtccctctgagagcagctctgacgcaggccttggcagcgaacacgagagc
gaagtagctaccatagaaactgctcaggcagcttccatctgtgaaagtgccttcgtgccc
cccgacgtctccctgatctccagcctgatcttcaagcacgtcccggccgcccgcattgtg
gaaaaccttggccacgagctcatctacgtcctaccctacggcgccgccaaggacggagcc
ttcgtggagctcttcaaggacatggacaatcacctccctgacctgggcatatccagctat
ggcgtctccgacaccaccctggaagagattttcctgaaagtggcagaggacaacggagtt
gacactgaagttccctcagacggtacactccccctgcgcagacgtcgtagaaatcatgcc
tttggtggaggaaatgccttcggtggagaccaccagagctgccttagaccccagattgat
gacgacaacaatgaacataacgactcggacgcagacccagaatccagagagaccgacttc
ttgagcggatcggacggtaaaggctcctacaaggtgacgggatggagtctgaagaggcag
cagtttgtggccttgatttggaagaggtttctgtacgctcaacgctccagaaaaggtttc
tttgctcagattgtactccctgctgtgtttgtgtgcattgccctggtcttcagtctcatc
gtcccacctttcggaaagtaccccagtctggagctgcagccatggatgtacgaagaacag
tccctcttcatcagcgatgacgcccctgaagacgctagcacacaacggttattgagtgcc
ctcaccgaaggacctgggtttggaacgcgctgcatggaaggacagcccatacctgacact
ccctgtacgatgggtgacgaagactggtccataccggaagtcccagagaccctactggaa
ctcttccgcacaggtaactggaccatggaggagccgtcccccgcatgcgcctgcagctgt
gacggccgcaagaaaatgctccctgagtgtccggctggagccggaggactgccgccccct
cagatgaagatcagtgagacagacaccctgcaaaatctgaccaacagaaacatctctgac
tatctggtgaagacctatgcagagatcattgggaaaagtttgaagaacaaaatctgggta
aatgaatttaggtacggtggcttctcattgggtgccaggagcaccaacgtcctccccgca
gctgacgaaattgacgatgccatcgctcgagtgaggaagatttttgaattggagaagggt
gcagccgcagaccgattcctggagagcttgtctagcttcatcaatggtctggacaccaag
aacaatgtcaagatttggttcaacaacaagggatggcacagcatgggagccttcctcaac
gtgatgaacaacggcatcctgcgctccaacctgccccctggcaaggaccccagcaagttt
ggcatccgcgccttcaaccacccgctcaacctcaccaaggagcagctgtcccaggtggca
ctgatgaccacctcagtggacgtcctggtgtccatctgcgtgatctttgccatgtccttc
gtcccagccagcttcgtagtcttcctcatccaggagagagtgagcaaggccaagcacatg
cagttcatcagcggtgtgcagcccctgctttactggactgccaacttcatctgggatatg
tgtaactatatcgtcccggcaacgctcgtcatcatcatcttcgtctgcttccaacaaaag
gcctatgtgtcgtccaccaacctgccagtgctggccctgctgctactgctctatggctgg
tctatcactcctctgatgtacccagcgtccttcttctttaagatccccagcacggcctac
gtggtgctgacctccgtcaacatcctcatcggcatcaacggcagcatctccaccttcgtc
atggagctcttcggagacaacgaaattgggggtatcaacaacatcttgaagaacgttttg
ctgatcttccctcacttctgtcttggccgaggtctcatcgacatggtgaagaaccaggcc
atggccgacgctctggagagatttggtgagaaccgcttccgatcccctctggaatgggac
atggtgggcaagaacctgtttgctatggccgtggaaggagtggtcttcttcatcatcacc
gtccttttccagtaccgcttctgcatcaagcccattaacctgcacaccaagctccctccg
gtgggtgaggaggacgaggacgtggccagagagaggcagaggatcgtcaacggactggga
cacggagacatcctggagctccgacagctcaccaaggtctacaagaggaagcaaaagcca
gttgtagaccgcctgtgtgtgggcatccctcctggagagtgctttggcctcctgggtgtg
aacggagctggaaagaccaccacattcaaaatgctgacaggagactccatggtcaccagt
ggagaagctttcctggctggaaaaagtatactgcgggagatagacgaagtgcaccagaac
atgggctactgtccccagtttgacgccatcaacgaactgctgacaggcagagagcacctg
gagttctacgccgtcctgcgtggagtgcccgagaaggaagtgtgtgaggttgctgaatgg
ggcatccgtaagctgggcctagtaaagtatgtggacaaggcagcaggaagctacagcgga
ggaaacatgaggaaactctccacggccatggccctaataggaggaccacccgtcgtgttc
ctggacgagcccactactgggatggaccccaaagcgcgcagggccttatggaactgcatc
cacagcgtcatcaaggagggacgctccgtggtgctcacctcgcacagtatggaggaatgt
gaggccctgtgcaccagaatggccatcatggtcaacggcagattccgttgcttggggagc
gttcagcacctaaagaataggttcggagacgggtacaccatcatcctgcgtgtggcgggg
gcggaccctgacctgccgccggtgatgaagttcattgagagcgagctgccgggcagcacc
ctgaaggagaagcacagaaacatgctgcagtaccagctgccctcctctctcacctccctg
gcacacatcttcagcatcctggccaagaacaaggacctgcttcggatagaagactactct
gtgtcgcagaccacactggaccaggtgtttgtgaactttgccaaggaccagagtgacgat
taccactcaaaagacaattcagttaagcgcaaagaggcggtgatggacacaaccccgctc
agctcgcggcaggctgaagagaagctcgccgaggagaggctaaaggagagcttggtgtga
DBGET
integrated database retrieval system
