KEGG   Oncorhynchus masou masou (cherry salmon): 135526447
Entry
135526447         CDS       T10723                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omm03041]
    135526447
Spliceosome [BR:omm03041]
 Complex B
  Other components
   Complex B specific factors
    135526447
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Ge1_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_BBS7 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_IP5PC_F VPS8_N DUF7165 LisH_PAC1 PROPPIN Beta-prop_NOL10_N LisH
Other DBs
NCBI-GeneID: 135526447
NCBI-ProteinID: XP_064810899
LinkDB
Position
32:complement(63404023..63408412)
AA seq 555 aa
MSLEVESADVIRLIMQYLKENNLHRTLTTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRVAIAQALAGEVSVVPPSRLMALLGQVSDMFLYTWNIWS
FHVNSAHSLIYDQDTIMQISILTTISVSQSLKWQQHQGLLPPGMTIDLFRGKAAVKDVEE
ERFPTQLTRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD
NFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFCKD
SSQLLSASFDQTIRVHGLKSGKSLKEFRGHSSFVNEATFTPDGHHIISASSDGTVKVWNM
KTTECTNTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSG
KREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNL
ISTYSEDGLLKLWKP
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgtctttggaggtggaatcagccgacgtgattcgtctgataatgcagtacctgaaagag
aacaatctgcaccggacattgaccaccctacaggaagagaccacggtgtctttgaacact
gtggacagtatcgagagtttcgtggcagacatcaacagtggccattgggacactgtgctg
caagctattcagtccctcaagctccctgacaagactttgatagacttgtatgaacaggtg
gtgttggagctcattgagttgagagagttgggagcagccaggtctttgttaaggcaaaca
gaccccatgatcatgctgaagcagacgcaaccagagaggtacattcacctggagaacctg
ctggctcgctcctactttgaccccagagaggcctacccagatggcagcagtaaggagaaa
cgacgggtggccatcgcccaggccctggccggggaggtcagcgtggtgcccccctcccgt
ctcatggccttgctgggacaggtgagtgacatgttcctatacacctggaatatatggtct
tttcatgttaattcagcacatagtctgatatacgaccaggatactattatgcagatcagt
attttaaccaccatctccgtctctcagtccctaaaatggcaacagcaccagggtctcctg
cccccaggtatgaccattgacctgttcaggggcaaggcagccgtgaaggacgtggaggag
gagcgcttccccacacagctcacaagacacatcaagtttgggcagaagtcccacgtggag
tgttcccgcttctcccctgatggtcagtacttagtcacaggatcagtagatggttttatc
gaggtctggaacttcaccactggcaaaatcagaaaggatctcaagtaccaggcgcaggat
aacttcatgatgatggacgatgcagtgctgtgtatgtgcttcagcagggatacagagatg
ctggccacaggggcccaggacggcaaaataaaggtgtggaagatccagagtggtcagtgc
ttgcggcgctttgagcgtgcccacagtaaaggtgtcacgtgcctcagtttctgcaaggac
agcagccagctgctcagtgcttccttcgaccagaccatcagggttcacggattgaagtcg
ggcaagtcgctgaaagagttccgaggacactcctcatttgttaatgaagcaacattcaca
cctgacggccaccatatcatcagcgcttcctctgacggcactgtgaaggtgtggaacatg
aagaccacagaatgcactaacaccttcaagtccctgggcacctcggccggcaccgacatc
acagtcaacaacgtcatccttctgcccaagaacccagagcactttgtggtgtgcaatcgc
tccaacactgttgtcatcatgaacatgcagggccagattgtgagaagtttcagctctggt
aagagggagggaggagactttgtctgctgtacactgtctccacgtggcgagtggatatac
tgtgtaggagaggactttgtgctctactgcttcagcacagtcaccggcaagctggagaga
accctaacagtccatgagaaggatgtgattggcatcgcccaccacccccatcagaaccta
atctccacgtacagtgaggacggcctactcaagctctggaaaccctga

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