Oncorhynchus masou masou (cherry salmon): 135526610
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Entry
135526610 CDS
T10723
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135526610
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
HrpB1_HrpK
TPR_MalT
UTP6_C
Motif
Other DBs
NCBI-GeneID:
135526610
NCBI-ProteinID:
XP_064811195
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All DBs
Position
32:complement(77050440..77062164)
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AA seq
729 aa
AA seq
DB search
MAAEGSDSEDLNTNGLMEAPSALEAIEAVQLPTEKEEASEENGGGGASEAPEAAAATSYN
MPLAENEEEEDGELPADFDRLWKLAHDNPQDFSSWTDLLQYCEQESHMTASRLALVAFLA
RYPLCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINLLLGTLNMNLPE
SSQRIRSAFEEAVTAAGLDFHSDRLWELYIEWEKEQGDMKAATGVYDRVLRVPTQLYSSH
YEKFKTHLNAHAPKDVLSAVEYEGLLEESKQSHKTEKSELAEGEEELPPGEEKEPTEEEL
IPKMRELLLARREKVYQDLEGEVRKRWNFEEAIKRPYFHVKPLDRTQLRAWHSYLDWELT
ELGGGGEKEVKTETEPEAMEGQEEEQKEEKEGSKSSEIVAGGDGRVRILFERCLIACALY
EEFWTKYVKYLEPQSLDEARGLFRRACEIHLAHKHTMHLQWATFEERHGDLTEARRVLEA
LETSVPGLAMVRLRRAGLERRAGRLDESEALLRDAVAQAKETPHLHAFYSIKLARLLLKL
CKNPSKARGVLQEALEISPDDGKLHLNLLELEVSGDPRGSAEGVQQCVTRALAAPLSPQT
KILFSQRGLQYAEDYGTSVQSVLTVYEEHQKLLKELGNKKRVAENGDSEDPEKMSKGEDG
SAVPAPPQAPPTMPHVPMTTPPPPMMGGDMNAVHAGYGGYGNWHQQPQYGGYGGYQQAWN
YNQGYYPPS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaggctcggattcagaagacctgaacaccaacgggctaatggaggctcct
tcagctctggaagccatcgaggctgtccaacttccaacagagaaggaagaggcatcagag
gagaatggtggaggaggagcctctgaggctccagaagcagcagctgcgacatcatacaac
atgcctctggcagagaatgaggaggaagaagacggagagttacctgcggactttgaccga
ctctggaagctggcccatgacaatccacaggacttctctagctggactgacctactgcag
tactgtgagcaagagagtcacatgacagcgtcacgtctggcgctggtagcctttctggca
cggtacccactgtgctacggatactggaagaagtttgctgacctggagcgacgtgctggc
tacaccaacaaagctcaggaggtgtgtgttcagggtctgaaggccattcccctgagtgta
gatctctggatccactacattaacctgctactgggcacgctcaacatgaacctgccagag
tcctctcagcgcattcgcagtgcatttgaggaggcggtgacggcagctggactagacttc
cactctgaccgtctgtgggagctgtacatcgagtgggagaaggagcagggagacatgaag
gctgccactggagtctacgacagagtcctcagagtccccactcagctgtacagcagccac
tatgagaaattcaagactcatcttaatgcccatgcgcccaaggacgtcctctcagcagtg
gagtatgaggggttgcttgaggaatctaaacagagccacaagactgagaagtctgagttg
gctgagggggaagaagagttaccacctggggaagagaaggaacctacagaggaagaactg
attccgaaaatgcgagagctcctattggctcgaagagagaaggtgtaccaagacctggag
ggagaggtcaggaagaggtggaactttgaggaagctatcaagcgtccatatttccacgtg
aagcctctggaccggacccagctgagggcctggcactcctacctggactgggagctcacc
gagctgggggggggcggtgaaaaggaggtgaagaccgagaccgaaccagaggccatggag
ggccaggaagaggagcaaaaggaggaaaaggaggggtcaaagagcagtgagatcgttgcc
gggggagacgggagggtacggatcctgtttgagcgctgtctgattgcctgcgctctctac
gaggagttctggaccaagtatgttaagtacctggaacctcagagtctggacgaggcgcgg
ggactgtttcggcgagcctgtgagatccacctggcccacaagcacaccatgcacctgcag
tgggccaccttcgaggagaggcatggtgacctaacagaggcacggcgagtgttggaggct
ctggaaacctcagtgccgggattggccatggtccggctgcgcagggcggggctagagaga
cgggcgggccggctagatgaatcagaagctctgctcagggacgcggtggcccaggccaaa
gaaacacctcacctccatgcgttctactccatcaaactggcccggctgctgctgaagctc
tgcaagaaccccagcaaggcccggggagtcctgcaggaggcgctggagattagcccagat
gacggtaagctgcacctgaacctgctggagctggaggtgtccggtgaccccagagggtcg
gccgagggggtgcagcagtgtgtgacgcgggcgctggccgcacccctctccccacagacc
aagatcctcttctcccagaggggcctgcagtacgctgaggactatgggacctctgtgcaa
agtgtgctaacagtctatgaggagcatcagaagctactgaaagagctcggcaacaagaag
agagtggctgagaacggagacagtgaggacccagagaagatgagtaaaggagaagatggc
tctgctgtgcccgctccaccacaggcccctcccacaatgccccatgtccccatgacgaca
ccacctccacccatgatgggtggggacatgaatgcggttcatgcaggctatggaggatat
ggaaactggcatcagcaaccacagtatgggggatacggaggctaccagcaagcctggaac
tacaatcagggttactaccctcctagctaa
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