Oncorhynchus masou masou (cherry salmon): 135526711
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Entry
135526711 CDS
T10723
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135526711
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135526711
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135526711
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135526711
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135526711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
135526711
NCBI-ProteinID:
XP_064811378
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All DBs
Position
32:complement(83165710..83171610)
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AA seq
882 aa
AA seq
DB search
MNWAVLLQNVLVTVHLRQILCSGSVRLSVPEEQEAGVRVGSIGSTFPPLYQLLTQFYLRV
DQGTGDVYTTNNRMDREALCPDQLQAEECIVPHDAIVGPEAELVKFMVVVEDINDHAPHF
DNTEIHLSVSEDVAVGTSFLLDDQAEDRDMGRNGQLQYHLGGAGGFFSVTVEEEDEVAIF
FLVVRQGLDREMQDLHEMTLVATDCGFTPLSATATVFIKVTDVNDNCPKFTLGSTQKVVI
TEDTPRDTVVARVRATDLDLGPNAAITYSLSPKVSERARELFSVDSHTGLISLRGDLRDR
HSDSVSDRGEEVVLKVLASGPHCPPADTQVTVSLLPAPYQENGIKIRFIAEHQNQTIVLQ
ENQPPTVLALLELPGDTSSVRGSSYLSVEGEVPFSLSLQKGKYLLSTSKPLDYEVKSEYH
VSVVMRGDVEEPAAQGFPRREIQVRVVDVNDNAPQFLQSHYQIDIEENNPPGASLLKVRA
QDADSGQNGQVTYKLDRPSHTAAAMALYRIDQNTGQLTVSVPLDREQQDVHRLTVVARDN
GSPPLESSVMVTITVLDQNDNAPVFITPHFIFFIPENIPPLAQVGKVGVSDIDAGLNGEV
EVRVMNSSGSPFVIDNAQGTLRCMADVDREKQDRYELDLLATDNGRPSPLTSIARVTVFI
EDVNDNQPQVILPSSNLSCLTISTGTTTGTMVTKIYAIDKDSGLNSEITYTIAAREPPGT
SPSSHHHGDSSSPFQLDARSGNVTLAQRLMGKDLGMHHLFIVVTDGGKPAPLHTTVWVNL
LVNDTLEPCHLDTMPRSLPYRLAQTPSETPSEMPVCDRHTQLILLLGLGMMVASLCLFLA
TGVLYMKQRKRSRGEQQKRRGIHEENQIPLRIPERYFLGEEL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggctgtactccttcagaacgtgctggtcacggtccatctcaggcagatcctg
tgctccggttctgttcggctctcggttccagaggagcaggaggctggggtccgggtcggg
tccatcgggtccacgttcccccccctttaccagctcctgacccagttctacctcagggtg
gaccaggggacaggggatgtctacaccaccaacaacaggatggaccgagaggccctgtgt
cctgaccaactccaggctgaggagtgtatcgtcccacatgacgccatcgtggggcctgag
gcagagctggtgaagttcatggtagtagtagaggacatcaatgaccacgctcctcacttt
gacaacactgagatccatctgagtgtctctgaggatgtggctgtagggaccagtttctta
ttggatgaccaggcagaggacagagacatgggacgtaacggacagctgcagtaccaccta
ggtggagccggtgggtttttcagtgtgacagtagaagaagaagatgaagtggccattttc
tttttggttgttcgacaaggactagaccgcgagatgcaggatcttcatgagatgactcta
gtggcaacagactgtggctttaccccactaagcgccactgcaacggtattcataaaagtg
actgacgtgaacgataactgcccaaagtttaccctgggcagcacccagaaggtggttatt
acagaggacacacccagagacacagtagtagccagggtcagagccacagacctagacctg
ggccccaacgctgccattacctactccctcagccccaaggtctcagaacgggccagggaa
ctcttcagtgtggacagtcacactggcctgatcagcctgagaggagacctcagagaccgc
cacagtgacagtgttagtgacaggggagaggaggtggtgttgaaagtgttagccagcggc
ccccactgcccccctgcagacactcaggtaaccgtatccctgctccccgcgccataccag
gagaatggcataaagatcaggttcatagcagagcatcaaaaccagacgatagtgttgcag
gaaaaccagccccccactgtcttggctttgctagagctaccgggggatactagtagtgtt
agaggctcatcgtatctctccgttgaaggagaggtgccgttctctttgagcctgcagaag
ggcaaatacctcctgtcgacatcaaagcctttagactacgaggtgaagagtgaatatcat
gtttctgtagtgatgcgtggtgatgttgaagaacctgcagcccagggcttccccaggaga
gagatccaggtgagggtggtggatgtgaatgataatgctccacagtttctccagagtcac
tatcagatagacatagaggagaataacccccctggggcgtctctgctgaaagtcagggcg
caggatgcagacagcggtcagaacgggcaggtcacttacaaactggatcgaccatcacac
acggcggcagcaatggccctttatagaatcgaccagaacacaggtcagctgacagtttct
gtacccctggacagggaacaacaggatgttcacagactgacagttgtagccagagataac
ggctctcctccattagagtcctctgtgatggtgacgatcactgtcctggaccagaatgat
aacgctcctgtcttcatcacccctcacttcatcttcttcatccctgagaatatacctccc
ctggcccaggtggggaaggtgggggtgtcagacatagatgcagggcttaacggggaggtg
gaggtgagggtgatgaacagcagtggcagccccttcgtcatagacaacgcccaggggacg
ctgcgctgcatggccgatgtcgaccgcgagaagcaggaccgctacgagttagatctgctc
gccaccgacaacggacgcccgtcacctctgacctccatcgccagggtaacagtgttcatc
gaggatgtcaacgacaaccagccccaggtcatccttcccagcagcaacctgtcgtgtctc
accatctccacggggaccaccacgggcaccatggtaaccaagatctacgccatcgacaag
gactcagggttaaactcggagatcacatacaccattgcagcgcgggaaccaccgggcacc
tctccatcatcccatcaccacggtgacagcagcagtcccttccagctggacgctcggtct
ggtaacgtgaccttagcccagaggctcatgggtaaggacctggggatgcaccacctgttc
atcgtggtgactgacggtgggaaaccagcacccctccacaccaccgtctgggtcaatctg
ctggtcaatgacaccttggaaccatgccatctggacaccatgcccagatccctgccctac
agactggcacagacgccctccgaaaccccctccgagatgcccgtctgcgacagacacact
cagttgatcctgctgctcggcctgggcatgatggtggcctcgctctgtctgtttctggca
acgggtgttttatacatgaaacagaggaagagatctagaggggaacaacagaagaggagg
gggatacatgaggagaatcagattcctctacgcattccggagagatatttcttaggagaa
gagttataa
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