Oncorhynchus masou masou (cherry salmon): 135526761
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Entry
135526761 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135526761
04120 Ubiquitin mediated proteolysis
135526761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135526761
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135526761
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135526761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
FAR1_N
zf-RING_Vps41
FANCL_C
Motif
Other DBs
NCBI-GeneID:
135526761
NCBI-ProteinID:
XP_064811469
LinkDB
All DBs
Position
32:86588825..86599743
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AA seq
627 aa
AA seq
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MVRAGLVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVA
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAP
VPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGPPGATDAPGATEAAQTQGAGTSHST
GASTVGAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMSEAE
LGELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEASGS
SPPSTSAETQENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDKRDEEEGDGEEVG
EDGEPNPSELRRRRLRKLETTPLPPDH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcaggcctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccactgtggtctacctcactaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaaatcttcttcggacagctgagagctgcggagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgttcagggatgacttctct
ccccgctttgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggttgactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctcatggtgttgctgggaatcctggactttctgtttgttaaccatgcctgt
cacagtatcatcacccgaggggcctctgtccaactagtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcaccggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagcagtaaca
gatgccataatgtcccggcgagccatccgcaacatgaatacactttacccagatgccacc
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtggct
ggagccaagaaacttccctgcaaccatatcttccactctagttgccttcgctcctggttc
cagagacagcagacatgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagccccccaccccagcccccgcccagccccctgccccagcagcacccgccaacgcccct
gtccctgggaacgttggccctggaatgatgccccacttccccccagggctgtttcctttc
tggggtcccttccctggagcggctccccctgctggtgctcctggtcccccaggggccaca
gacgcccctggggccacagaggcggctcagactcagggcgctggtaccagtcattccaca
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttc
ccctccttcccacccccaccgttcccctcagctccgtggctgactatgccaccacctcca
ccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtcagaggctgag
ctgggggagctggagcaggagggccgtagaggcctggaggccagactgcagtgtctccac
aacatccacactctactggacgctgccatgctcaacatccaccactacctcactaccgtc
gccacgctcactcctcctcagtcagaaaccagcagcgctgctggagaggccagcggatca
tctcctccctccactagtgcagaaacccaggagaaccaggagaatgactctcagagcagt
acagccgctgaacctgaagctgtgaatggggccacaggtttctcccagccagactctacc
acgttgggcgacagtgaagacaagcgggatgaagaggaaggagatggagaagaagtcggc
gaagacggagagcccaacccttcagagctgaggcgccgtcgtctccgcaaactcgagacc
acaccccttcctcctgaccactga
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