Oncorhynchus masou masou (cherry salmon): 135526811
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Entry
135526811 CDS
T10723
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135526811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135526811
03036 Chromosome and associated proteins [BR:
omm03036
]
135526811
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135526811
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135526811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
135526811
NCBI-ProteinID:
XP_064811555
LinkDB
All DBs
Position
32:93293612..93411544
Genome browser
AA seq
2549 aa
AA seq
DB search
MSKASAESTDQVMEEEVGQLPITDEEEEEEEEAGSSTETERPSSSHTKRKPSVAAKQVGG
NESDTSDESGQDDGASDGMLVVRPPAGTDNKEDKSRGAMKLRVDLSRRKTGKMSKASAES
TDQVMEEEVGQLPITDEEEEAGSSTETERPSSSHTKRKPSVAAKQVGGNESDTSDESGQD
DGASDGMLVVRPPAGTDNKEDKSRGAMKLRVDLSRRKTGKMSKASAESTDQVMEEEVGQL
PITDQEEEEEEEAGSSTETERPSSSHTKRKPSVAAKQVGGNESDTSDESGQDDGASDGML
VVRPPAGTDNKEDKSRGAMKLRVDLSRRKTDTTLQERIDCTACGQQVNHFQRHSVFEHPM
LHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRK
ELSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWRTGRKKEREEKERKEVKGHS
KGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKRTKKLIETTTGLNNTFIHFI
QQAEEEQGAGGGVGSGTRHRHLKAFRSVLADLKKAHAALEEDLEAQFTSQDQGMQNGDAV
SNTDGHDGHDQIDNGQEAEEDKMADTEDGEEDGGVSEDTEMEESPTPTPQDHSETGSQAK
NQTVVKMEEEDGTEEEAERDKDIVSVGPSVPDELFQMVKSLADSTGLTPGNDATQLTAAS
QSESPAAGSTRKSHHTQKEKAMPKVKNLILKLTPVPVVTTRASRSKSKDGGKEKERSKDG
GKEKERSKDGGKEERSKDGGKEKERSKDGGKEKERSKDGGKERSKDGGKEKERSKDGGKE
KERSKDGGKERSKDGGKERSKDGGKERSKDGGKERERSKDGGKEKERSKDGGKESSKDGG
KERERSKDGGKERERSKDGGKEKERSKDGGKESSKDGGKERERSKDGGKEKERSKDGGKE
RSKDGGKERSKDGGKERSKDGGKEVEGDGASEEDSRCSSRTKTTPLRKSPEGKNKMSASQ
ENIDSEGEQKSPSKLKRRTKGSSEKERGNAEEKERKESKASSMVTADPSKQDVDSDSDEV
PDILVQTAAAEHSSDEDVQQDADSNQGNKRVKKCLFKLSKKEEEEQVGEEEEEEQVGEEE
EQQVGEEEEEQVGEEEEEEVGEEEEGENDKKTDKKLATKRKLKADDSDNSESDSDEDTKK
KKKSSTASDKKTSKKKQKVSDGSSNSDLEKEMKGLSKLATGKRRSSRVKKEREEKENKGG
DRRRSYELKRKARSRGAKQQDSSSDDDEEVEEGGGSGEESGDQQKIKPIVEETVVAGRET
FHQSSGEEGNHDASQMAADDDDDDPENRIAKKMLLAQIKANYSSGAEESSDEDGEEKEQR
KGGEDEEEEEEEDDGEEEEEEEEEGDSGSDMDVKKSGGRRHRLLRHKLTLSEGESGEEKE
KPASKGKKETKRTRRKVGSDDSADVDSEESASSSESGVSEEISEEEEEESEEESEEGSSR
RRTTRSSKKKKKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKK
IRKILKDDKLRTETRDALKEEEERRRRIAEREQLREKLRETLHVPPDQVLVVEEASAVAC
PITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCI
LAHCMGLGKTLQVVTLLHTLLLCEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESL
EVTELATVKRPQERASALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDP
GPDFVICDEGHILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLG
SVKEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKH
EYVVSVRVTPIQCTLYRHYLEHLTGAGNVVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQL
DYISKENKGYFDEDSMDEFIASETEESSMSMTSEDEKQKKKKKRGKTRKKDSDSDSDALE
VIKEWNTSSRGGDPSSRNRAEPQEEVRPASSPGTRSPDWHKEFVTEADSEILEHSGKMVL
LFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELAGRAKEEEKQSPYKGEGKWFRNIDYY
RLDGSTNALNRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLIGANRVIIFDASWNPSYD
IQSIFRLYRFGQLKTCYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNEL
TELYAFEPDLLDDPTGKKSKRTTPMLPKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEA
LSEEDRKAAWAEYEAEKKGLSLRVNHGAYGGQMDMGGANSYFPFNVAALASMSNPQLEEL
INQGRQKVMEATNALKFLPRESLEDTIGRVWKENPALTESQVQAMALGRQASVEMELKRR
EAVYRDVLNKQQTLMMYVQKVITNRKVREQQMAMANQAQLMSQMNGMLGAGGMSQMELLG
LYQQLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcctcagctgaatctacagaccaagtgatggaggaggaagtaggtcagctt
ccgattacagacgaagaggaggaggaagaggaggaggctgggagctcaacagagactgag
agaccctcctcttctcacaccaagaggaagccttctgttgcagccaagcaagttggaggg
aatgagtcagacacctcggacgagagtggacaggacgatggtgcctcagatgggatgttg
gttgtgcggcctcctgctgggactgacaacaaggaggacaagagcagaggagccatgaag
ctccgagtggacctctcacggagaaagacaggtaaaatgagtaaggcctcagctgaatct
acagaccaagtgatggaggaggaagtaggtcagcttccgattacagacgaagaggaggag
gctgggagctcaacagagactgagagaccctcctcttctcacaccaagaggaagccttct
gttgcagccaagcaagttggagggaatgagtcagacacctcggacgagagtggacaggac
gatggcgcatcagatggtatgttggttgtgcggcctcctgctgggactgacaacaaggag
gacaagagcagaggagccatgaagctccgagtggacctctcacggagaaagacaggtaaa
atgagtaaggcctcagctgaatctacagaccaagtgatggaggaggaagtaggtcagctt
ccgattacagaccaggaggaggaggaagaggaggaggctgggagctcaacagagactgag
agaccctcctcttctcacaccaagaggaagccttctgttgcagccaagcaagttggaggg
aatgagtcagacacctcggacgagagtggacaggacgatggtgcctcagatgggatgttg
gttgtgcggcctcctgctgggactgacaacaaggaggacaagagcagaggagccatgaag
ctccgagtggacctctcacggagaaagacagataccactttgcaggagaggatagactgc
accgcctgtggacagcaggtcaaccacttccagcgccactcagtgtttgagcacccaatg
ctccatgtgctcctctgcaagtcgtgttacaagtattacaccagcgatgacatcaataaa
gacgaggacggcatggacgaacagtgcaggtggtgtgctgaaggtggcaacctgatctgc
tgtgacttctgccacaacgccttctgtaagaagtgcatcctgcgtaacctgggccgcaag
gagctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcag
cctctctcagacatcgcctccaactgctccaacatcttgaccaagctggagagcttctgg
cgcacgggacgcaagaaagagagggaggagaaagagaggaaggaggtgaaagggcacagt
aagggtaaaggtcaccaccaccatggtaaagctgtggtgaacggtaaggaacattcagac
gggtcagggaccctcaccttctcctataagaccctgaaggttcccaaggagctggtgaag
aggaccaagaagctgattgagacgaccacggggctcaacaacaccttcatccatttcatc
cagcaggctgaggaggagcagggagcaggaggaggagttggcagcgggaccagacacaga
cacctcaaggccttcaggtctgttctggctgatctgaagaaggcccatgctgccctagag
gaggacttggaggcacagttcacttcccaggaccaggggatgcagaacggggatgctgtt
tccaacactgacggccatgatggccacgatcagatagacaatgggcaagaggcagaagag
gacaaaatggccgacactgaggatggggaggaggatgggggtgtgtcagaggacacagag
atggaggagagccccacccccacgcctcaggaccactcagagacaggcagccaggccaaa
aaccagacagtggtgaaaatggaggaggaggatggaacagaggaggaagcggagcgggat
aaagacattgtgtccgtcgggccgtccgtccctgacgagctcttccagatggtcaagagt
ttagctgactccaccgggttaacgcccggtaacgacgccacgcaactcacagcggctagc
caatcggagagccccgcggctggctcaaccaggaagtcacatcacacccagaaggagaag
gccatgcccaaggttaagaacctcatcttgaagctgacgcctgttcccgtggttaccaca
cgcgcctccaggtctaagagtaaggatggagggaaggagaaggagaggagtaaggatgga
gggaaggagaaggagaggagtaaggatggagggaaggaggagaggagtaaggatggaggg
aaggagaaggagaggagtaaggatggagggaaggagaaggagaggagtaaggatggaggg
aaggagaggagtaaggatggagggaaggagaaggagaggagtaaggatggagggaaggag
aaggagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggagggaaggagagggagaggagtaaggat
ggagggaaggagaaggagaggagtaaggatggagggaaggagagcagtaaggatggaggg
aaggagagggagaggagtaaggatggagggaaggagagggagaggagtaaggatggaggg
aaggagaaggagaggagtaaggatggagggaaggagagcagtaaggatggagggaaggag
agggagaggagtaaggatggagggaaggagaaggagaggagtaaggatggagggaaggag
aggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggat
ggagggaaggaggtggagggagatggggcctctgaggaggacagccgatgctccagtcgc
acaaagaccacacccctcaggaagtcaccggaggggaaaaacaagatgtccgcctctcag
gagaacatcgactcagaaggcgagcagaagagccccagcaagctgaagaggagaaccaag
ggcagctccgagaaagaacgggggaacgcggaggagaaggagcggaaagagagcaaggcc
tcctccatggtaactgctgacccttcgaaacaggacgtggactcagattctgatgaggtt
ccagacatcctggtccagactgcagcggcggaacacagctcggacgaggatgtgcagcag
gacgccgacagtaaccagggcaacaagcgcgtcaagaagtgcctgttcaaactgagcaag
aaagaggaggaggagcaggtgggagaggaggaggaggaggagcaggtgggagaggaggag
gagcagcaggtgggagaggaggaggaggagcaggtgggagaggaggaggaggaggaggtg
ggagaggaggaggagggagagaatgacaagaagacggacaagaagctggcgactaaacgc
aaactgaaagccgacgactccgacaactcagagtctgactccgatgaagacacaaagaag
aaaaagaagtcctccacggcttctgacaagaagacatccaagaagaagcagaaggtctcg
gacggctcctccaactcggacctggagaaggagatgaagggactcagcaaactggcgacg
gggaaacggaggagcagccgtgtgaagaaggaaagagaggagaaggagaacaagggcgga
gatcggaggcggtcgtacgaactaaaacgcaaagccagaagtagaggagccaagcagcaa
gattcatcgtctgatgatgacgaggaggtggaggagggaggagggtctggagaggagagt
ggagaccagcagaagattaaacccatcgtggaggagacggtggtagcagggagggaaacc
ttccaccagtcctcaggagaagaaggtaaccatgacgcttctcagatggcggctgatgat
gatgatgatgatccagaaaacaggattgccaagaagatgctgctggcccagatcaaggct
aactactcttcaggagcagaggagagctctgacgaggacggagaagagaaggaacagagg
aagggaggagaggatgaggaagaggaggaggaggaggatgatggtgaggaagaggaggag
gaggaggaggaaggggactctggctctgacatggatgtgaagaagagtggggggcgtcgc
caccggctgctccgccacaaactgactctgagcgagggagagtcaggagaggagaaagag
aaaccagccagcaaggggaagaaggagaccaagaggaccagacggaaagtgggcagtgat
gactcagcagacgtagactctgaggagtcggctagcagcagtgagtcaggagttagtgag
gagatcagtgaggaggaggaggaggagtcagaggaggagtcagaggagggcagcagtcgc
aggaggaccacgcgctcctccaagaagaagaagaagaagaaggaggagaggagctacgcc
cagaagaagaaacgccgtcgcatcaaggttcaggactcttcatctgatgagaagagcggg
tcaggagaggacggctcggggaaggaggatggagacactcctaaaggacagaggaagaag
atcagaaaaatcctcaaggacgacaagctgaggacggaaacgagggatgccctgaaggag
gaggaggagaggaggagacgcatcgctgagagggagcagctcagggagaagctcagagag
actctacatgtccctcccgaccaggtactcgtggtggaggaggcgtccgccgtggcttgt
ccaatcacaaccaagctggtgctggatgaagacgaggagaccaaggagcccatggtgcag
gttcaccgcaatctggtcactaagctcaaaccacaccaggtcgacggggtccagttcatg
tgggactgctgttgtgagtccgtgaagaaaaccaacaagaactctggttctggatgtatc
ctggctcactgtatgggtctgggaaaaacactgcaggtggtaaccctactccacacacta
ctgctgtgtgaaaagttagacttctccacggctctgatcgtctgtcctctcaacaccgtt
ctcaactggctcaacgagtttgagaagtggcagtacggcttcaaggacgaggagagttta
gaggtgacggagctggccacggtgaagcgtcctcaggagagagcgtctgccctgcagcag
tggcaggaggatggaggaatcatgatcattggctatgagatgtaccggaacctcacacag
ggtagaaacatcaagagcaagaaactcaaagagaccttccagaagaccctggttgaccca
ggcccagactttgtgatctgtgatgagggccacatcttgaagaacgaggcgtcggccatc
tctaaagccatgaactccatcaagacccgacggagagtggtgctcaccggcactccgctg
cagaacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctgctgggg
tcagtgaaggagttcaggaaccgttttgtcaaccccatccagaacgggcaggcagccgac
tccacggaccaggatgtacggatcatgaagaagagggctcacatcctctacgagatgctc
aatggatgtgttcagagaagagactactctgccctgaccaagttcctgcctcctaaacat
gagtacgttgtgtccgtcagagtcacgcccatccagtgtactctataccgacactacctg
gagcacttaacaggtgcggggaacgtggtggaggggggtcggggccgagccgggaccaaa
ctgttccaggacttccagatgctcagcagaatctggacccatccctggtgcctgcagctg
gactacatcagcaaggaaaacaaggggtactttgacgaggacagcatggacgagttcatc
gcctcggagaccgaggagtcttccatgagcatgacctctgaagacgagaaacagaaaaag
aagaagaagagggggaagaccaggaagaaggacagtgactcagacagtgacgctctcgag
gtgataaaggagtggaacaccagctcccgagggggagacccttccagccgcaaccgggcg
gagccacaggaggaagtgcgcccagcttccagccctggcaccaggagtcctgactggcac
aaggagtttgttacagaggccgactctgagatcctggagcattctgggaagatggtgctg
ctgtttgagatcctccgtatggccgaggaggtggaggacaaagttctggtgttcagtcag
tctctgatctctctggacctgattgaagacttcctggagctggctggccgagccaaagag
gaggagaaacagtctccctacaaaggtgaggggaagtggttccggaacattgactactac
cgcttggacggctccaccaacgccctgaaccggaagaagtgggcagaggagttcaatgac
accagcaacgtccgagggcggttgttcctgatctcgaccagggctggttctctgggcatc
aacctgataggagctaacagggtcatcatcttcgacgcgtcctggaacccgtcgtacgac
atccagagtatcttcaggctctaccgcttcggacagctcaagacctgctacgtttaccga
ttcctggctcagggtactatggaagagaagatctatgaccgccaggtggctaaacagtct
ctgtccttccgagtggtggatcaacagcagatagagagacatttcaccatgaatgagctg
acggagctctacgcctttgaacctgaccttctggatgatcccactggcaagaagagcaag
aggaccacgcctatgctgcccaaggaccccttcctagctgagctgctccacagcaataag
gagcagattgtgggctatcatgaacatgactccctgctggatcacaaggaagaggaggct
ctcagcgaggaggaccgcaaagcagcctgggccgagtacgaggcggagaagaagggtctg
tctctgcgtgtgaaccatggagcgtacggaggacagatggacatgggaggagctaacagc
tacttccccttcaacgttgccgcactggcctctatgtccaaccctcagctggaggagttg
atcaaccagggccgtcagaaggtgatggaagccaccaacgctctcaagttcctccccaga
gaatctctagaggacaccatcgggagagtgtggaaggagaacccagccctaacggagtcc
caggtccaggccatggctctggggagacaggccagtgtagagatggagctcaaacgaaga
gaagctgtctacagagacgtcctcaacaagcaacagactctaatgatgtacgttcagaag
gtgatcaccaacaggaaggtgagagagcagcagatggccatggccaaccaggcccagctg
atgagccagatgaacggcatgctgggagctggagggatgagccagatggaactcttgggg
ttgtaccaacagctgggggcgctacagggtcatcccacccacccctccatgggcggcaag
aaccccggcccctccaagggcaacctgtaa
DBGET
integrated database retrieval system
