Oncorhynchus masou masou (cherry salmon): 135526928
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Entry
135526928 CDS
T10723
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135526928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135526928
03021 Transcription machinery [BR:
omm03021
]
135526928
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
135526928
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135526928
RNA polymerase III system
TFIIIB
135526928
RNA polymerase I system
SL1/TIF-1B
135526928
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
135526928
NCBI-ProteinID:
XP_064811667
LinkDB
All DBs
Position
32:17016746..17019314
Genome browser
AA seq
306 aa
AA seq
DB search
MDEDSALESYFDDPIGNVPDASGFLFEGDLGLQGAPQLQDPSFLSSLSQPEKDIGEDLDL
SFLPDDLPEDTCGNAATNANMTQDRVFDGYRPEESAETDPNQSAMTGGSTFCPMTPMTPM
TPVAESSGIIPMLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEG
LVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERGEIYEAFENIYPIL
KGFRKQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattggagagttattttgatgacccaattggaaatgtaccagat
gcctctggcttcctgtttgaaggggacctgggcttgcagggcgcccctcagctccaggac
ccatcctttctctcctcgttgagccaaccagagaaggacatcggggaggatctggatctc
agcttcctgcctgatgacctgccagaggacacctgtggaaatgctgctactaatgctaac
atgacacaagaccgcgtgttcgatggctacaggcctgaggagtctgctgagactgaccct
aaccagtcggccatgacgggaggctctaccttctgtcccatgacgcctatgacccccatg
actccagtggctgagagttctggaataatccccatgttacagaatattgtatctacagtg
aatctggcttgcccactggacctgaaatccatcgctcttcaagccagaaacgctgagtac
aaccccaagcgttttgctgctgttattatgagaatacgggaacctaggaccacagcactc
atcttcagctccggaaagatggtctgcacaggagccaagagcgaggagcagtctcgactg
gctgcccgcaagtatgctcgtgtggtgcagaaattgggctttcccgccaaattcctggac
ttcaagatccagaacatggtggggagttgtgatgtctgctttcccattcggctggagggt
ctggtgctgactcatcagcagttcagcagttatgagccagagctgtttcctggtttgatc
taccgtatggtgaaaccacggattgtcttactgatctttgtgtctggaaaagtggttctg
acaggggctaaggaacgtggagagatctatgaagcctttgagaacatctaccccattctg
aaaggattcagaaagcaataa
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