Oncorhynchus masou masou (cherry salmon): 135527079
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Entry
135527079 CDS
T10723
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135527079 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135527079 (pitx2)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
135527079 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
135527079
NCBI-ProteinID:
XP_064811800
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Position
32:66872994..66880319
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AA seq
319 aa
AA seq
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MNSMKDPLNLDHHHHHHLTGTKLSSTHHTALAMASSLQPLQRSVDSKHRLEVHTVSDTSS
PESVEKDSKGQSKTDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYEDMYPSYTYNN
WAAKGLTSASLSTKSFPFFNSMNVNPLSTQTMFSPPNSISSMSMTSSMVPSSVTGVPGSS
LNSLNNLNNLSNPSLNSGVPTPTCPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYTS
VQNPGSNLSACQYAVDRPV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccattgaatttggaccatcatcaccaccaccacctaaccggg
actaaactctcctccacgcaccacacggcactagcaatggcctctagtctgcagccgttg
cagcggtctgtggactccaaacaccggttagaggtgcacacagtatcagacacctccagt
ccggagtccgtagagaaagactcaaagggccagagcaaaactgacgactcttcagatgat
ccttctaaaaagaagcgacagcggcgacagaggactcacttcacaagccagcagctacag
gaactggaggccacgttccagaggaatcgctatccggacatgtctacaagagaggagata
gccgtgtggaccaacctcacagaggcccgcgtcagggtgtggttcaagaaccggcgagca
aaatggaggaaaagggaaagaaaccagcaagccgagctatgcaagaacggcttcggtcct
cagttcaatggacttatgcagccctatgaagacatgtaccccagctacacatacaacaac
tgggccgccaaagggctaacttcggcctccttgtccaccaaaagcttcccttttttcaat
tccatgaacgtcaaccctttgtcaacgcagacgatgttctccccgcccaactccatctct
tcaatgagcatgacttccagtatggtgccgtcctcggttactggcgtgcccggttcgagc
ctcaacagcctcaataatttaaacaaccttagcaacccctctctgaattcgggagttccc
acgccaacctgcccgtacgccccgccgacccctccttatgtgtacagggacacttgtaac
tccagtctggcaagcctgagactgaaagccaagcagcattcgagttttggatacaccagt
gttcagaatccaggctcaaatctgagcgcgtgccagtacgccgtggatagaccagtgtaa
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