Oncorhynchus masou masou (cherry salmon): 135527297
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Entry
135527297 CDS
T10723
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135527297 (rlim)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135527297 (rlim)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135527297 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
135527297
NCBI-ProteinID:
XP_064811958
LinkDB
All DBs
Position
32:93922766..93931644
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AA seq
707 aa
AA seq
DB search
MSHASLDNNLLGTPDNNLLGTPGEITAEELLSRLQQIKDGPEQQQPSINTSETGEATGEP
TEPAEGPEDPSNGDTLLDWLNTVRRTGNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEIN
VNRNLAEQQARADVETGEGEAQEEGPAEAPGDGVEAVVGVEVQAGTGAGTGAGTGAEAVA
GAVAGAVAGAGAETETGAGTGTGTEVPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEA
EMVPELVVEVVPQPPSPVTATPPVSRPASPLVQATPAPAPPSPPPEEPPRRGQRRARSRS
PEQRRTRARTTRSRSPLTLDRLDGLPRHVPNAAPSHSPPTLPPQAPAEGSSRTRQHVLSR
QSTAEYDVQSAGTGSGNAPEPVTTPPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRPGEYR
QRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGL
GEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVA
GMAEGAEPPVSVGGPSVGGAGEARTEEREGEDGMGVGLAPGIGLGVGGTPREGRGRPRAP
ISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEY
AEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgcctcattagacaacaacctgctgggtaccccagacaacaacctgctgggt
accccaggtgagatcacagcagaggagttgttgagtcggctgcagcagattaaggatgga
ccagagcagcagcagccgagcatcaacaccagtgagactggagaagctacaggagaacca
acagaaccggcggaaggtccagaggacccgtctaacggcgacaccctcttggattggctg
aacaccgtcaggcggacaggcaacaccacccgcagtggtcaccgaggcaaccagtcatgg
cgggcagtgagccggaccaacccaaacagcggagacttccggttcagtctggagatcaac
gttaaccgtaacctggctgagcagcaggcccgcgccgatgtggagacgggcgagggggag
gctcaggaggaaggcccagcagaagcacctggcgatggggtggaggcagtggtcggagtg
gaggtccaggcagggactggggcagggactggggcagggactggggctgaggctgtggca
ggggctgtggcaggggctgtggcaggggcaggggcagagactgagactggggcagggact
ggaacagggactgaggtgcccatggagacaggagaggtgctggaggaaccagttgtggag
gagatggctgtcatagtggaaccagaagcggagatggagccagaggctgaagtagaagca
gagatggtcccagagttagtagtagaggtagtcccacagccgcccagccctgtcaccgcc
acccctcctgtctccagaccagccagtcccctggtgcaggccaccccggcccccgccccc
cccagcccgccccctgaggagcctccccgacggggccagagacgagcccgcagccgtagc
cctgagcagcgccggaccagggctcgcaccacacgaagccgttcccctctcaccctggac
cgactggacggcctcccccgccacgtgcccaacgccgccccttcacacagcccccccacc
ctgcccccccaggcccccgcagagggaagctcacggactcgacagcatgttctgtcccgg
caaagcactgcagagtacgatgtccagtcagccggaacagggtctgggaacgccccagag
cctgttaccaccccaccccaggagggagaggccgcgggcggggagggagcagcaggacga
cgtccccccaccatcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgc
cagagggacagcattgctaacagaacccgctcacgctcccagaactccaacaacaccttc
ctgtacgagagtgagaggggggggttccgcaggaccttctcccggtccgagcgtgcgggt
gtgaggacgtacgtcagcaccatcaggatccctatcaggaggatcagtgatgcggggttg
ggagaggccacctccatggctctgcagaccatgatacgacagatcatgaccggcttcgga
gagctcagctacttcatggactcagactctgactcctcggactcaaaccgtggcggtggt
aaccccactggcgctgccgacctggccgaggcgctcaacactcccgacgggggagtagcc
ggcatggcggagggggcggagcctcctgtctccgtgggtgggcctagtgtgggaggagct
ggggaggcaaggacagaggagagggagggggaggacgggatgggtgtaggtctggcccca
gggataggtttaggggtggggggcacccccagggaggggcgaggtcgcccccgtgccccc
atcagtctggaggaaccggggtcactacccttcctccgccttgctcacttcttcctcctg
aatgatgaggatgaggaacagcccagaggactcaccaaggagcagatcgacaacctctcc
accaggaactttggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtat
gccgaggggaacaagttgaggaagttgccctgttctcatgagtaccatgttcactgtatc
gaccgctggctgtctgagaactccacctgtcctatctgccgcagggccgtgttggtgtct
gcgaaccgggagagtgtggtctaa
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