Oncorhynchus masou masou (cherry salmon): 135527392
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Entry
135527392 CDS
T10723
Name
(RefSeq) serine--tRNA ligase, cytoplasmic-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135527392
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omm01007
]
135527392
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135527392
Enzymes [BR:
omm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
135527392
Amino acid related enzymes [BR:
omm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
135527392
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135527392
Prokaryotic type
135527392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
135527392
NCBI-ProteinID:
XP_064811981
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All DBs
Position
33:43871693..43887781
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AA seq
513 aa
AA seq
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MVLDLDQFRADKGGDPEVIRETQRKRFKDVSLVDKLVHADTEWRKCRFTADNLNKAKNLC
SRTVGEKMKKKEPIGEDDSLPDDTQNLEALTADTLAPLTVTQIKKVRLLVDEAVQKSDSE
RVKLEEERFQYLREIGNLLHPSVPISNDEDADNKVERTWGDCTVQKKYSHVDLVVMIDGY
DGEKGAIVAGSRGYFLKGPLVFLEQALINYALRMLHSKNYQMLYTPFFMRKEVMQEVAQL
SQFDDELYKVIGKSSEKSEDTAIDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVFASPHDNKSWEMMDEMIGTAEEFYQTLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSAAFRELVSCSNCLDYQARRLRIRYGQTKKMMDKA
DYVHMLNATMCATTRVMCAILETYQTEEGIIIPEVLRNFMPPGMTEMLKFVKPAPIDVEM
SKKQKKQQDGGKKKQGSGDQLQNQVENMSVHNS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgatttggaccaatttagagccgataaaggcggtgatcctgaagtaatcaga
gagacgcaaaggaaaaggtttaaagacgtgtcacttgtggataaactggtacacgcagac
acagaatggagaaaatgtcgttttactgccgacaacctcaacaaggcaaagaatttatgc
agcagaaccgttggcgagaaaatgaagaagaaagagccaattggggaggatgattctctc
ccagatgacacccagaacttggaggccctaacagcagacacactagcgcccctcacggtc
acccagatcaagaaggtccgtctgcttgtggatgaggcagtgcagaaatctgacagtgag
agggtaaagctggaggaggagcgctttcaatacctgagagagatcggaaacctcttgcat
ccatctgtgcccataagtaatgatgaggatgctgataacaaagtggagcgcacttgggga
gactgtactgtgcagaagaagtattcccacgtggacctggtagtcatgatcgatggctac
gacggagagaaaggagctatagtggcagggagccgtggctacttcctcaaggggccacta
gttttcctggagcaggcattgatcaactatgctctgcggatgctccacagcaagaactac
caaatgctgtacacccccttcttcatgaggaaagaggtcatgcaggaggtggctcagctc
agccagtttgatgatgaactttacaaggtgattgggaagagcagtgagaagtctgaggac
acggccattgatgagaagtatctgattgctacctcggagcagcctattgcagccttcctg
agagacgagtggctgaagccagaggagctgcccattcgctacgccggcctctccacctgc
ttcagacaggaagtgggctcccatggccgtgacacccgaggcatcttcagggtacaccag
tttgagaagattgagcagtttgtatttgcctctcctcatgacaacaagtcctgggagatg
atggatgagatgattggaactgctgaggagttctaccagacactagggatcccctaccgc
atcgtcaacatagtctcaggtgctctgaaccatgcagccagtaagaagctggacttggag
gcctggttcccagggtccgcagccttcagagagctggtctcctgctccaactgtttagac
taccaggctcgtcggctgcgtatccgctacggacagaccaaaaagatgatggacaaggcc
gactatgtgcatatgctcaacgcgaccatgtgtgccaccacacgtgtaatgtgtgctatc
ctggagacgtaccagacagaagaaggtatcattattccagaggtactccggaacttcatg
cctccaggtatgacagagatgctgaagtttgtaaagcctgcccctattgatgtggagatg
tccaagaagcagaagaaacagcaggatggagggaagaagaagcagggaagtggagaccag
ctccagaaccaagtggagaacatgtctgtccacaattcctag
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