Oncorhynchus masou masou (cherry salmon): 135527413
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Entry
135527413 CDS
T10723
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135527413
04120 Ubiquitin mediated proteolysis
135527413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135527413
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135527413
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
U-box type E3
135527413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
135527413
NCBI-ProteinID:
XP_064812020
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All DBs
Position
33:46734869..46819476
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AA seq
1216 aa
AA seq
DB search
MELSADEIRRRRLARLAGGQTSQPSTPLTSPQRETPPGPLPGTSGATPQPFPPAASHALG
LNVQSITSATSPMCASGVAYRSQSSEGVSSLSSSPSNSLETQSLSRSQSMDIETASCEKS
SISQVDVDSGIENMEVEDNDRRERRNLAEKESAETSDVSEEQALQLICKILRVSWKEQDR
DVIFLPSLAAEFHQSSPKDVYSDFKDLIGQILMEVLMMSSMSHTHNPFASLTATSQPIAA
AKSPDRHLTLVQPSSQGGSPMATCASSFGASSLSSLGVSAGGIDSQSCSDCFSIEACMET
EMLNYLIERFDSVGMEESKAPKICSHPSVSQLLSNIRSQCISHAALVLQGALTQPRSPLQ
QSLLVPYMLCRNLPYGFIQELARMTHQEEVFRQIFVPILQGLGLAVKECSFDSDNFKFPL
MALAELCEIKFGKTHPMCNLMTSLPLWCPKSLGPGMGREVQRLSFLGAFFSLSVFAEDDT
KVGDKYFSGPAITMENTRVGSQTLQHYLESARGDLFKILHNILLNGETREVALNYMAALV
NRNVKKAQMQTDDKLVSTDGFMINFLSVLQQLSMKIKLEMVDPYYIFHPLCRLQVSREET
RLKATMEELKTWLAEIYDPSKLYDPKFPTECFFLTLHTHHLSILPGCRRYIRRLRAIREL
NRTVEELKSSESQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQF
YSMVIQLILRMVDPAYPHITLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYSPQVLYEP
CVQNIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENHQLSVKHL
VPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNMGHHGTFLEEFNSGKQFVRY
INMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQSRQSQLTQDERVSRSY
LALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGF
EPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMKKAGIKSTITIEKFKL
LSEKVEEIVARNSQSEMDYSDAPDEFKGFFFVSPGLRSNELTSSQFDRDIQVKGRPSIVA
KLRTFYPLMDTLMTDPVILPSGNIMDRAIILRHLLNSPTDPFNRQPLNESMLESLPELKE
RIQAWMRGKQGQGRFL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagtgccgacgagatccgcaggaggagattggcaagactggcaggaggacaa
acatcccagcccagcactcccctgacatccccacagagagagaccccccctgggcccctt
cctgggacctcaggggccacaccccagccctttccaccagctgcctcacacgcactggga
ctcaatgtccagagtatcacctctgccacctctcctatgtgcgcctcaggtgtggcgtac
cgcagtcagagcagcgagggtgtgagctccctctccagctctccctccaacagcctggag
acccagagtctgtccagatctcagagcatggacatcgagactgcctcctgtgaaaagagc
agcatatcccaagtggatgtggactcagggatagagaacatggaggtggaggacaatgac
cgcagggagaggaggaacctggctgaaaaggaatccgctgaaacctcagatgtctctgaa
gagcaggctctgcagctcatctgtaagatcctgcgtgtctcctggaaggagcaggacaga
gatgtcatctttctcccctcgcttgccgcagagttccaccagagcagccccaaagacgtc
tactctgacttcaaagacctgattggccagatcctgatggaggttctcatgatgtccagc
atgtcgcacacccacaatcccttcgccagcctgactgccacgtcccagcctattgctgct
gccaaatctcccgaccgccacctgacgctggttcagccctctagccagggcggcagtccc
atggccacctgtgcaagctcatttggggccagctctctgtccagtctgggtgtgtctgca
gggggaattgactcgcaatcctgcagcgactgcttctccatcgaggcgtgcatggagact
gagatgctcaactacctcatcgagcgcttcgacagtgtcggcatggaggagagtaaggcg
cccaagatttgcagccaccccagtgtcagtcagctcctcagcaacatacgctcacagtgc
atttcccacgccgctcttgtccttcagggtgccctcacgcagcccaggagccccctgcag
cagtccctgctggtgccctacatgctgtgccgaaacctgccgtatggctttatccaggag
ctggcccgcatgacccaccaggaggaggtcttcagacagatcttcgttccaatccttcaa
gggctgggtctggctgtgaaagaatgttccttcgacagtgacaactttaaattccccctc
atggctttagctgagctctgtgagataaagtttgggaagactcaccccatgtgcaatttg
atgacatctctgcccctatggtgtcctaagtccctgggcccggggatgggccgagaggtt
cagagactgtccttcctgggagcattcttcagcctgtcggtctttgcagaggatgacacc
aaagtgggtgacaagtacttctcgggcccagcgatcactatggagaacactcgtgtgggt
agccaaaccctgcagcactacctggagtcagcccggggtgacttgtttaaaattctccac
aacatcctactaaatggagagacaagagaggtagcgctgaactacatggcagctctggtc
aaccgcaatgtgaagaaagcccagatgcagacagatgacaagctggtgtccacagacggc
ttcatgattaacttcctgtcggtgctgcaacagctgagcatgaagatcaagctggagatg
gtagacccgtactacattttccaccccctctgccgcctgcaggtcagccgtgaggagacc
cggctcaaggccaccatggaagagctcaagacctggctggccgagatatatgacccctcc
aagttgtatgatcccaagttccccacagagtgtttctttctgacgttgcacacccaccac
ctgtccatcctaccaggctgccggcgctacatccgcaggctgagagccattcgcgagctc
aacaggacggtggaagagctgaagagtagtgagagccagtggaaggactctccgctggcc
agccgacaccgagagatgctgaagagatgcaaaacccagctcaagaaactggtgcgctcc
aaagcctgtgccgatgcgggtcttctggacgagaacctgttacgcagatgtctgcagttt
tacagtatggtcattcagctcatcctacgcatggtggatcctgcctacccacacataact
ctaccactgaatcctgagatccccaaaagctttgctgctctgccagagttttacattgaa
gatgtggccgagttcctgctttttgttgtgcagtattcccctcaggtcctttatgagccc
tgtgtccagaacattgtcaccttcctggtggtgttcatctgcagtcagaactacatccgg
aacccctacctgatcgccaagctggtggaggttctgtttgtcaccaacccagctgtgcag
ccgcgcacccagcgcttctctgagatgatggagaaccaccaactgtccgtcaaacatttg
gtcccggccctcatgaagttctacactgacgtggagcacaccggtgccaccagcgagttc
tatgacaagttcaccatccgctaccacatcagcaccatcttcaagagcctctggcagaac
atgggccaccatggcactttcctggaagagttcaactccgggaaacagtttgtgcgttac
atcaacatgctgatcaacgacaccaccttcctgctggacgagagcctggagtccctgaag
cgcatccatgaggtccaggaggagatgaagaacaaggagcagtgggatcagcttcccagg
gaccagcagcaaagccgccagtcccagctgacccaggatgagcgggtgtcccgctcctac
ctggccctggctacagagacggtcgacatgttccacatcctcaccaagcaggtccagaag
cccttcctccggcccgagttggggcctcgtctggcggccatgctgaactttaacctccag
cagctatgcgggcctaagtgccgggacctgaaggtggagaacccagagaagtacggtttt
gagcccaagaagctcctagaccagcttactgacatttacctgcaacttgactgtgcccgc
ttcgccaaggccatcgccgacgaccagcggtcatacagccgagagctctttgaggaagtg
atttccaagatgaagaaagccggcatcaagtccaccatcaccattgaaaaattcaagctg
ctatcggagaaggtggaggagatagtcgccaggaactctcagtccgaaatggactacagt
gacgcacctgacgagtttaaaggattttttttcgtgagtccaggacttcggtcaaatgag
ctgacttcaagtcagtttgatcgggacatacaagtaaaaggaagaccctctatcgtggca
aaactcaggacattttaccctctgatggacacattaatgactgaccctgtgatactgccc
tctgggaacatcatggaccgagccatcatcctccgccaccttctcaactcccccactgac
ccctttaacagacagcctctcaacgaaagcatgctggagtcactccctgaactgaaggag
aggatccaggcatggatgagagggaagcaaggccagggacgtttcctctag
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