Oncorhynchus masou masou (cherry salmon): 135527926
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Entry
135527926 CDS
T10723
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135527926
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
General mRNP proteins
135527926
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_10
RRM_8
CDC45
Motif
Other DBs
NCBI-GeneID:
135527926
NCBI-ProteinID:
XP_064812663
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All DBs
Position
33:complement(17549505..17560703)
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AA seq
535 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKSSSANGHEERSSKKKKRSHSRSSRSPSSDKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKIGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTAVANPAMNLGPSMNQAMN
LPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIYVDKNSPQGNVY
VKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPSRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgacattgaggctatgctagaggctccatacagaaaggatgagatc
aagtcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctgacaagcgcagaagcaagagcaaagacaggaag
aagagccgggacaggaagaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagcggctcccatagcagggagcgtgctgggcgctacagaggacgccgcagc
ccctttttggggccgaaatttaacggtggtccaggagggaagattggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagccagaatccgaccacgagatctagaggacttcttctctgctgtgggg
aaagtgagagacgtgaggatgatctccgatagaaactccaggaggtcaaagggcatcgcc
tacattgagtttctggaggcgaattcggtcccattggccattggcttgactggacagaga
cttcttggagtgcccatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcggctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctcc
tttgcagatgcagagtgcgctaagaaagcattggagcagttgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccaccgccagctcc
ttcctggacaacgacgagctggagaggacgggcattgacctgggcaccaccgggcgcctg
cagcttatggcccggctggcagagggtactggtcttcagattcctccagctgcacaacag
gctctacagatgagtggttccatgcactcctcttcaatccacttcggcaacatggcagct
ggtacagctgtcgccaaccctgccatgaacctgggtccaagcatgaaccaggccatgaac
ctcccaactcaaccactggctacacactgcctacagctgtccaacatgttcagcccacag
tcggaaaatgagcctggttgggacatcgagattcaagatgacgtcatggaggagtgcaac
aaacatggtggaattgtccatatatatgtcgacaagaactcacctcagggcaacgtgtac
gtaaaatgccccactatcccaacagcgatggctgcagtgaatgccctacatggacggtgg
tttgcaggtaaaatgatcactgcggcatacgtacccctcccaacctaccataaccttttc
cctgattcggtaacggccacccagctactgatgccttcgcggcgatag
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