Oncorhynchus masou masou (cherry salmon): 135527984
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Entry
135527984 CDS
T10723
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135527984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135527984
Transporters [BR:
omm02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
135527984
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
135527984
NCBI-ProteinID:
XP_064812782
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Position
33:complement(20040124..20054410)
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AA seq
726 aa
AA seq
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MATNGTKADGQVTELNEVATNDKPKSLDVKGENTKKDLPERETWGGRFDFLLSCVGYAIG
LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETALGQYTSIGGLGVWKLAPVFK
GVGLAAAVLAFWLNIYYIVIIAWAIYYLYNSFTTELPWSSCGNPWNTEKCYSNYSIVDNT
NLTSAVMEFWERNMHQMTDGLEKPGQIRAPLAITLAIAWVLVYFCIWKGVSWTGKVVYFS
ATYPYFMLFILFCRGVTLPGAMDGILFYITPNFEKLKESEVWLDAATQIFFSYGLGLGSL
IALGSYNPFNNNVYRDSIIVCCINSFTSMFAGLVIFSIVGFMANVTNRPIQEVAASGPGL
AFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRALRGRRELF
IAAVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGVNKFYDN
IQEMIGYKPCIWWKLCWVCFTPLIVAGVFLFSAVQMVPLTLNNYVFPAWGQGVGWLMALS
SMVLIPGYMVYMYLGLKGTWKERLQIMFQPPAVVRRPQENGPEAVVAETNIASPSNPANP
VNLANPVSPANTASPGNPASSGNQASSGNPASPANPTATSPVAAAPASPTPPAIPVTLAS
PVNPTSLTVPTVPTVPITPANPTSPTSPPPNPVSAAPTEPAIPPLNIASSTNSTNLTNLT
NAEANV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacggcaccaaagcagatggacaagtaacagaacttaacgaagtggcaact
aatgacaaacccaagtcactggacgtgaaaggggaaaataccaaaaaggatcttcccgaa
agagaaacatggggagggcgattcgatttccttctgtcctgtgtaggttatgcaattgga
ctgggcaacgtatggagatttccatatctctgtggaaaaaacggtggaggagccttcttg
atcccctattttttgacactcatatttgctgggatgcccctgttcctgctggagacggct
cttggtcaatacacctcaattggtgggcttggagtctggaaactggctcccgtattcaaa
ggtgttggccttgcagcagctgtcctggccttctggcttaacatttattacattgtcatc
attgcctgggccatttactatctctacaactcctttactactgaacttccatggagctca
tgtggcaatccatggaacacagaaaagtgttactcaaactacagtatagttgataacacc
aatcttaccagcgcggtgatggagttttgggagcgcaacatgcatcaaatgactgatggc
ttggaaaaaccagggcagatccgagctccactggcaataacactggccatcgcttgggtc
ctagtgtacttctgtatctggaaaggggtgagctggactggcaaggttgtgtacttctcg
gccacgtacccctatttcatgcttttcattctgttctgccgtggagtgactctacctgga
gctatggatggaattctcttctatatcacccctaactttgaaaaactaaaagaatctgag
gtatggctggatgctgccactcagatatttttctcctacggtttgggactgggctcactg
atagctcttggcagctataacccttttaataataatgtttacagagactctatcatagtg
tgctgcatcaactccttcaccagcatgtttgcgggcctggtcatcttctctattgtgggc
ttcatggcgaatgtgactaacagaccaatacaagaagtcgcagcttcaggtccaggcctg
gcttttctggcataccccgaggctgtgacccagctgcctatttctcctctctgggctatc
ctgttcttctccatgctgctgatgctggggattgacagtcagttctgcacagtggagggc
tttataacagctctggtggatgagtttcccagggcactgaggggcaggagagagctcttc
atcgctgctgtctgcctggtctcctacctgatcggcctgtccaacatcacacagggaggc
ctgtacgtgttcaagctctttgactactactctgccagtgggatgtgtctcctcttcctg
gtcttctttgagtgcatctccatatcctggttctacggtgtgaacaagttctatgacaac
atccaggagatgattggctacaagccctgtatatggtggaagctgtgctgggtctgtttc
actcctctcattgtggctggggtgttcctgttcagtgcagtccaaatggttcctctcacc
ttgaacaactacgtgttccccgcctggggccagggagtgggctggctcatggctctgtcc
tccatggtcctcattcctggttacatggtctacatgtatctcggactcaagggcacctgg
aaagagcgcctgcagataatgtttcagccgcctgcagtggttcgacggccacaggagaat
gggcctgaggcagtggttgcagagaccaacatagctagtccttctaacccggccaaccca
gttaacctggccaacccagttagccctgccaacacagcaagccctggcaacccagctagt
tctggcaaccaggctagttctggcaacccagctagtcctgccaacccaactgctacaagc
ccggttgctgcagccccggccagcccaacacctccagccattccagttactctggctagc
cctgtgaacccaaccagtctgaccgtcccaaccgtccctaccgtccctatcactccagcc
aacccaaccagccctaccagcccaccacccaatccagttagcgcagcaccaactgagcca
gccatcccaccactcaatatagcgagctcaaccaactcaaccaaccttaccaacctaacc
aacgcagaggccaatgtctag
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