Oncorhynchus masou masou (cherry salmon): 135527990
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Entry
135527990 CDS
T10723
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135527990
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135527990
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
135527990
NCBI-ProteinID:
XP_064812791
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Position
33:20224371..20234821
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AA seq
417 aa
AA seq
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MEELVKKMRLREWLIAQIDSGKYAGLTWENEDKTMFRIPWKHAAKQDYSLNEDAALFKAW
AVYKGKYREGRDKADPTTWKTRLRCAFNKSTDFKEVPERSQLDVSEPYKVYHIQAEPETG
RDSESPQPESQVIIQTSRSSVPLRNIVTHHPQFGYNSESEARDGRVNSREGLAGDHVYHW
SNTGNPQRDGSAPLSIVVPTPQISDLRVRVCLFYQGQLVVDVTTSTPDGCFLLQGQVPLG
NERIYGPCTAQQVPFPPPGVIHHPPGIAEAMGRLLPHLERGVLVWVAPDGVFIKRFCQGR
VYWSGPLAQHTDRPNKLDRERTCKLLDTAIFLKELQDYIQGAGPKPRYEIDLCFGEEFPD
ASQQKTRKLIIAQVVPLFAVNLLHRCLRMGTEGRPRLHTHKTMGEEGEGQPHSLPQR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtcaagaaaatgcgtttgagagagtggctgatagcgcagatagacagc
ggaaagtatgcaggacttacctgggagaacgaagacaaaactatgttcaggatcccatgg
aaacacgcggcaaaacaggactatagtctgaacgaagatgcagcactattcaaggcgtgg
gcagtgtataaggggaagtatcgggaggggagggacaaggcagatcccaccacctggaag
actcgtctccgctgtgccttcaacaagagcacagacttcaaagaagtcccagagcgcagc
cagttggatgtatccgagccctacaaggtctaccacatccaggcagagccagagacaggc
agagactcagaatctcctcagcctgagagtcaggtgatcatccagaccagccgctccagt
gttccactgaggaacattgtcacacaccatccacagtttggctacaatagtgaatcagag
gccagggatggaagagtcaactccagagagggcttggcaggggaccatgtgtaccactgg
tccaacacagggaatcctcagagggacggctctgctcctctctccatagtcgtccctaca
ccacagatctctgacttgcgtgtgcgggtgtgtctgttctatcagggccagctagtagtg
gatgtgaccaccagcaccccagacggctgtttcctcctgcagggtcaggtgcccctgggg
aatgagaggatctatggaccctgcacagcccaacaggttcctttcccccctccaggggtc
atccatcatcccccgggcattgctgaagccatgggccgcctgcttccccacctggagagg
ggcgtcctggtgtgggttgctccagacggggtgtttatcaagaggttctgccagggcagg
gtgtactggagtggccccctggcccaacacacagacaggcccaacaaactggacagggag
aggacctgcaagttgctggacacagctatatttctgaaggagctccaagactatatccaa
ggggcgggacccaaacctcgctatgagattgacctctgctttggtgaggagttccctgac
gccagccaacagaaaaccaggaaactgatcattgcacaggtggtgcccctgtttgctgtc
aacctactgcataggtgtctgaggatggggacagaggggagaccacgccttcacacacac
aagaccatgggggaagagggagagggtcagccacactccctaccccagcggtaa
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