Oncorhynchus masou masou (cherry salmon): 135528045
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Entry
135528045 CDS
T10723
Name
(RefSeq) mRNA export factor-like isoform X1
KO
K14298
mRNA export factor
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135528045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135528045
03036 Chromosome and associated proteins [BR:
omm03036
]
135528045
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135528045
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135528045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
eIF2A
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_WDR75_1st
ExoI_SH3
Beta-prop_WDR41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
135528045
NCBI-ProteinID:
XP_064812883
LinkDB
All DBs
Position
33:22861280..22865872
Genome browser
AA seq
372 aa
AA seq
DB search
MSLFGASTGFGAGGFGAATTDTHNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWA
NDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSEDGSKVFTASCDKTAKMWDLNSNQAIQI
AQHDAPIRTVHWIKAPNYNCIMTGSWDKTLKFWDTRSPNPMMSLQLPERCYCADVVYPMA
VVASADRGLIVYQLENQPSEFRRIDSPLKHQVTGLTYQHRCIAIFKDKQNKPAGFALGSI
EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGR
FSFWDKDARTKLKTSEQLDQPITACSFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLR
NATEELKPRNKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcggggccagcactggctttggcgctgggggatttggagcggcaaccacg
gacacccacaacccaatgaaggatgtggaagtaacctcacccccagatgacagcatcagt
tgcttggcgttcagtcctcctgccatgccagggaacttcttaatagggggatcctgggcc
aatgatgtgaggtgttgggaggtacaggacaacgggcagacagtccccaaagcccagcag
atgcacacgggtccagtccttgatgtctgctggagcgaagacggtagcaaggttttcact
gcgtcttgtgacaagactgccaaaatgtgggacctcaacagcaaccaggcaatacagatc
gcacagcatgatgctcctatcagaacagtccactggatcaaagcacccaactacaactgc
atcatgacaggcagctgggacaaaactctgaagttctgggacacccgctcgcccaaccca
atgatgtctctgcagttgccagagaggtgctactgtgcagacgtggtgtaccccatggca
gtggtagcgtctgcagaccgaggtttgattgtatatcagcttgaaaaccagccgtctgag
tttaggaggatagactcaccactcaaacaccaggtgactggtctcacataccagcaccgc
tgcatagccatttttaaggacaaacagaacaagcctgctggatttgctctcggaagcatt
gaagggcgggttgcaattcactacatcaaccctcctaacccagccaaggataacttcacc
tttaagtgccacaggtcgaatggaaccaacacagccacaccacaagatatctatgctgta
aatgccatctccttccaccctgtccacgggacactggcgactgttgggtcagatggtcgc
ttcagcttctgggataaagacgcccgcaccaagctgaagacctcagagcagctggatcag
ccaatcacagcatgctccttcaacaacaacggcaacatctttgcttacgcctccagctat
gattggtcaaagggacatgagtactacaaccctcagaaaaagaactacatcttcctgcgt
aatgctactgaggagctgaaaccacggaacaagaaatga
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integrated database retrieval system
