Oncorhynchus masou masou (cherry salmon): 135528133
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Entry
135528133 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135528133
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135528133
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135528133
Protein kinases [BR:
omm01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
135528133
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135528133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
Motif
Other DBs
NCBI-GeneID:
135528133
NCBI-ProteinID:
XP_064813054
LinkDB
All DBs
Position
33:complement(25891040..25909580)
Genome browser
AA seq
1327 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVNPLIAIETYLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEGSISSNVSPVENTNGGTTELKSENAVIVIESNSKEGED
SQSQENISQVPTPANVSGGGDASSNSAGAVGEGSTSSSPVGNTNGGTTESSAAGDTAGTS
PALTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQL
RQQHMQQQAFAQQKQQQQHQQQQHQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHQQQQH
QQQQQHQQRIQEQMRIASQMSQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPNMYPP
HHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQMTVDSEMSDHRFRLLHLTGHSN
PGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLPCL
PNIPPIQLEDAGSSSLDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSNSH
TPVRPSSTSSTGSRGSCGSAGRPGPASGPMEQQVKVKQEPGAEKECGFSGTTTSNVKTEQ
GKDGGRSACMMSSSEGRRTPPLPLLGSVTSGSSIQDILKKVGEHVKTEPQDQEACSGSNR
PGNAPITTSSTSTLASAALLTNGKGAASAALRSPRTAQGTTQSGAGGKEDDPNEDWCAVC
NNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRDEKDN
SEQGLSPEDQRRCERLLLYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLK
HVQHYQSPKEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYF
EERLLELYPDESFPEVPEEPEVPEVPEEPQAPAGEGEEADLTEDSEDEFVQPKRKRLKTD
EKPMHIK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
cagggagaggatagcggagacccagaattgaaagatgtgaatccgctgattgccatagag
acatatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
cccgctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaaggcagcattagcagtaatgttagcccagttgagaacaccaatggtgggacaacc
gaattgaaaagtgagaatgcggtgattgtcatagagtcgaactcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcggaggaggg
gacgctagcagcaacagcgcgggcgcagtgggagaaggcagcactagcagcagcccagtt
gggaacaccaatggggggacaaccgagtcctcggctgctggggatactgctggaacctca
ccagcactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttacggtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgtaaacaaagtgacatcattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgccgataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggtcaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgagactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcattgagacgcacatggtcaaactgcaggagaaaaagacctac
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagccgtgttcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagacagacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagcggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggtcctgaaggctggactggaaccagtgcctcaggctaacggagct
gttcgttttttctgtgaccccacattctgggccaagaacgtggtcaacctagggaacctg
gtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatctcc
ccgggccacggccacccaggccacggcaaaagccctgggcagatcaatctggcccagctc
cggcagcagcacatgcagcagcaagccttcgcccagcagaaacagcagcagcagcaccaa
cagcagcagcaccaacaacaacaacagcagcaacaacaacaacagcagcaacaacaacaa
caacaacagcagcaccaacaacaacaacagcagcagcagcagcaccaacagcagcagcac
cagcaacagcagcaacaccaacagaggatccaggaacagatgcgtattgcctcccaaatg
tcccagcagcaccccaggcaggctgtacctcagatggtacagcagcagcccccgcgcctc
atcagtatgcaggcccagcagaggggccccatgaacggcgggcccaacatgtacccccca
caccacctgcgcttgcccccgggacagggccgcatgcccagctccagcgcccagccgcgc
atgcccaacggccagcagtactcccccatgatgcagccccagctgcagagacagatgact
gtagattctgagatgagcgaccacaggtttcgtttgttacatctcactgggcattcaaac
ccaggtcatgctggacccttcccagtggcatctctccacaacgtgagcgctgccaacccc
accagtcccaccagtgccagcatggccagcgcccatgcccaccgtggccccgccagcccc
atagtgggcgccatcgacctcatcccctccgtcaccaacccagagaacctgccatgccta
ccaaacatcccccccattcagctggaagacgcgggctccagcagcctggatgccctactg
agtcgctacatcttagccagcacataccctcagctgggcctggggccccccgggaacatg
aacctctcccacggaccctccacacactcccctggctcctcaggcttatcaaactcccac
acgcctgtgcggccatccagtacgtccagcacaggaagcaggggcagctgtggatctgcg
ggtaggccagggccagcaagtggcccaatggaacagcaggtcaaagtcaagcaggagccc
ggagctgagaaggagtgtggtttctcgggaaccaccacctccaacgtcaaaactgaacaa
gggaaggatggagggaggagcgcgtgcatgatgagtagttcagagggcagacgtactccc
cctctgcccctgttgggctctgtgacttctggctcctctatccaggacatcctcaagaag
gtgggggagcatgtcaaaactgagccccaggaccaggaggcctgcagtgggtccaacagg
cctggcaatgcccctatcaccaccagcagcacatccaccttggcctctgccgcactgctg
accaatggtaagggagccgcatccgctgccctgcgctctccacgcactgcacaggggacc
acccagagcggggcaggagggaaggaggacgaccccaatgaggactggtgtgctgtgtgc
aacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccacatcacctgt
cacatccccaccttgaagtgctccccgagtggtgagtggatgtgcacgttctgccggagc
ctggcaagcccggagatggagtaccagcctgacgacgagcctcgtgacgagaaggacaac
agtgagcagggcctgagtcctgaggaccagaggaggtgtgagcgcctcctgctgtatgtt
ttctgccatgatctcagtgaggggttccaggagcctgtccctccctctatccctaattac
tacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagctacagttgaag
catgtccaacactaccagagcccgaaggagtttgtctcggatgtgcgcctggtcttcagc
aactgtgccaagtacaatgagatgtctcgaataatccaggtatatgatgaggagaaacag
agtaatgtgcaggcggactccgaggtggcggaggcagggaaagctgtgagtttgtacttt
gaggagaggctgctggagctctatccagatgagagtttccctgaggtaccagaggagccc
gaggtaccagaggttcccgaggagccccaggccccagctggagagggagaggaggcggat
ctcacagaagactcagaggatgagtttgtgcagcctaaacgcaagcggttaaaaacggat
gaaaagccgatgcacatcaagtaa
DBGET
integrated database retrieval system
