Oncorhynchus masou masou (cherry salmon): 135528136
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Entry
135528136 CDS
T10723
Name
(RefSeq) intermembrane lipid transfer protein VPS13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Membrane trafficking [BR:
omm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135528136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135528136
NCBI-ProteinID:
XP_064813105
LinkDB
All DBs
Position
1:complement(19752924..19820591)
Genome browser
AA seq
3263 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLKLGIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEQENPALEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDDVTNPKCPLSFGMSLQ
NLSLQTADENWKPCLLNEKAKLFFKLVQLDNLFAYWNVNSMLYSNHMPDEALRCLQNSMD
IYSSTPMKHDFIFRPITANAKLSMNPRSDVNFSSPKVDLVVNLREVAVELNRPQYISILE
LLGSVDMMSRNLPYRKYRPQFHVHTNAYIWWQYVIMGIMEVDVKPRLHMWSWQRIHRHRQ
TVKCYRALYKSKITNKKPTEKLLREVEETERTLDIFNITLARQQAEMEASKAGLRIFRPG
VKVEEESQGWLGWMWSGWSGDDGAKSKEVKTGAFGELMTPAEKAKLYTAIGYSEVAVNHN
LPKNFEDIKIHFHMKRMSFSMKDNKDQNEILKVTVEDLKTMLTQRPGAQAIKLSAQLSLF
EVKGLANNRPAPTLLSSRKAATVTGTPLLDILFETNPLDESADQRLHVESQPLEIIYDAV
TVNSMSAFFLPPDDLQLDELTNATLMKLEQFRDRTSTGLMYVIETQKVLDLNVNLMASYV
IVPQTGFYDSTQNLMLLDLGHFKVSSLSRKRLPQLSVGSRTIQDIMSQAYDSFNIKLSSL
QFLYSKPDGDWRKARKLKQSALHILEPVDVKVVFSRAMVVTDSRMPKFKIFGEMPLLSLR
ISDDKVRAVLELINSIPLPESRPAPRSTNTHSTPKAPKQSHTPQLTPRQPTMAELRNSLI
WESGSEEDLFYDAPSSPIGDSPFFPDNMPSPLQRSDSVKRRGLVKKDPKKNMTEFLMTFE
INKLSVQLCRLSRGQEVTVLHLDVERLGTELKIRTFDMTSNTFLREICLECSEYMDSEEK
KVHLITTLDNTKEDLLTLEYTKADKNGPEFKSQYKNTEQSVKVNFSSLDVHLHTEALLNA
MNFLNSLLPPTKEALPSKEELPTIAEEDKGEGEEGEKEESALAKRTSSKKSKFEDMVNLH
IRADLNCLKVFIRGHSHMIAEICIEGLVSEVLMRRKAVEVLANLKNIVILDCDKEALYKQ
CVSIADKEVFAFRMVNHTDATEGDAYLDMGKVDTSITLTVGCIQVIFLNKFVSSILAFIN
NFQAAKEALAEVTVQAAEKAATGVMELAERSVRISLDVDFKAPLVFLPQSSSSTNVTVAD
LGMVTVKNCFALVDSQTHVKIPPIIDTMTVVLSDLKMYRTTFEKGRFQGEIQVLKPVNLD
LSIQRNLSASWYHSIPDIKITAHLKPMNLILSQDDMTVVLRTLGENMSETSDAASPRPPP
STVDHSDTATSKGSEGTGGTGTISTSGNIVVTAAVVETQKSTKLKNILKVDFKFDSMTLV
LYSPNGTEVQVLDSRDDQLMLAEFTLGTISTSVHMFSDGSMKASVKLTDCLLDDKRCRVK
NITARMMAIRPSAEKNVMVELNYNQGREGTSLETVVQDVYLCASMEFLLTVADIFLKASQ
QGFSSAAPKNSSTKPTVTATTAFKEPAPVAVKSEMNVLVKNPEIVFVADLTCADAPALVM
TMECELVMKSNPDGQLMTAVVKDLKVVACPFLREKRRNKETTVLQPCQVFFKSTQSSTSP
QAMEVSIKALTLKVSPIIINTVITIQSVLSPAGADMPQSELESPVPPDLWERRSWRDLKL
WFLEEEGKDEDAQSLVRLIPQGESLQVAISSICLTLEAGVGHRTVPMLLAKSSFHGDVKN
WSTLINLHSQLNLEVHYFNEVMGVWEPLLEPLEDEIRDGFRSWTLGLKMKKKPVKYSGIS
DEVDYSIPDYKTIISISSKDQLNITLSKCGLGMLSNLGTAFAEAAKQTSESFQEDEAPFV
VKNRLGLTVSVVYSEMFCPLGRVATENRVELQNGESVNMDYRRTTTHSDQFSAMTSLVAK
DYYIQPTPSGHTSASMIPLIKVGRGMYSVMHKVSGVTRFLVCQIYSVQGSKHIKIRSPFQ
IINHFSIPFRVMEGSMCLGMSLPTEEFCVPLDSYRSKLSLQPVTEGDNQYDSSEGFSYES
VSQQPGTRVQQTCHRHGNSASVLMVNIVPLKDTVTSQHTGVAGEHFDEPYILHLWPSVLL
RNLLPYPITYRLQDSEEPTPITLMDGHSAELHTAVMDLSSLELRLLNYLGQDWKAHYGLH
GDQDEITFIVFCSLHDEDEEVRLGEGGERKRAELDIAVHVKYDAGLTEVAIHSPYWMVNK
TGRLLQYKADDIHRKHAMDYDMPLLFSFKPRNFLHNNKVRLMISDSELSDDFSLDTVGSY
GEVKCKGRLKDYLIGVKIDPSSFSLTRIVSFVPYYLLVNRTKHVIWVGEEGQDHWTKANP
HQAAIPFWPEKDSKKLKIKVEGCQSTPQTMDFTKPENCLLLHLDNTLGGVIVDVNLSDHS
IIIRFSDYHDGAAPFLIINHTLEQTLEFYQRLRRDSSKCLADELLELSFSLEETQHSSQK
EKDKLSPGKAVYYTWAEPTGSRSLAWQCGSYSGELKSEEDLRLDVNEEGKLYLISFYEGL
QRVALFTEDRRIYKLLCESEKAELAEQEIILSLQDVGVSLVNNSNHQEVSFIGITSSDVM
WEFKPKKKSRWKPLSFKYAALLETHFREYTESGSVDNSILDLESNFQVSLTPNRQDMRMM
KPCDAPIRRNFLPGVKVEYSVSARQSAYRVQINRIQIQNQLPGAIFPYVFYPIKLPKSVT
MDSEPKPLTDISIVTRAAGHSDISRIKYFMVLIQEMDLKLDLGFLYAILDLFTPENASVM
TSEQMVELFEKDIKYLKTELNNISAADTSPISLYEYFHISPIKLHLSLSLSSGGEDGNKE
KRETEVIPVQSLNLLLKSIGATLTDVQDIVFKLAYFELTFQFRTRQQLQWEVIRHYSKQA
IKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGG
AVGGIAGAASRITGAMAKGVAAMTMDEEYQQKRREAMNKQPSGLREGLTRGGKGLVSGFV
SGITGIVTMPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRAAETSQ
DVESLRPPRFIHEDGVIRPYKEREGVGSQMLQKIENGQFAKYRYFAHAKVNESDFLMITK
SGIFFVTKGTFGQLTCEWQYLFDEFTKKPMIVEGRRLRIEAKERVKSVFHAKEFGKIINF
KSPEIAEWVLTKLEDARESLHKY
NT seq
9792 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcgtggtggtagatgtcctaaacaggtttctgggggactacgttgtg
aaccttgacacctcacaactcaagctcgggatttggggaggtgatgctgtgctcagaaat
cttgaaataaaggaaaatgccttgagtcaacttgacattccttttaaagtaagagccgga
catataggacgtttggagctgaagattccatggaagaatctgtacactcagtctgtggaa
gctacactggatggagtttacctgctcatcgtgcccacagccagtataaagtatgatgca
gagaaggaggagaaacagcttcaggaggctcgtcagagggagctgcagaggatcgaagag
accaaacagaaagcagctgaacaagaaaaccccgcacttgagaaacaagacacctttgtg
gagaaactggtgacacaggtgatcaagaaccttcaggtgaagatctccaacatccacatc
cgctatgaggatgacgtcaccaatcccaaatgcccattatcatttggaatgtctctacag
aacctcagccttcagaccgcagatgagaactggaaaccttgtcttctgaatgagaaagcc
aagctgtttttcaagcttgtccagttggacaatctctttgcctactggaacgtgaactca
atgctgtactccaatcacatgccagacgaggccctgcgatgcctccagaacagcatggat
atctatagttccacccccatgaaacacgatttcatttttcgtccgataacggccaatgcg
aagctgagcatgaacccccggtcagacgtaaacttctcttcacccaaggtagacttggta
gtcaacctgagagaggtggccgtggagctgaacaggccacagtatatcagcattctggag
ctcctgggctcggtggatatgatgtcacgcaacctgccgtacaggaaataccggccgcaa
ttccatgtgcacaccaacgcctacatatggtggcagtatgtgattatgggcatcatggag
gtggacgtgaagccacggctgcacatgtggtcgtggcagcgcatccaccgccaccggcag
acagtcaagtgttacagagcgctctacaagtccaagatcaccaacaagaagcccactgag
aagctgctcagggaagtggaggagactgagcggactctggatatttttaacatcacgctg
gccaggcagcaagctgagatggaggcgagcaaggcgggtctgcgtatctttcgtccgggg
gtgaaggtggaggaggaatctcagggctggttgggctggatgtggtccggctggtcagga
gatgacggcgccaagtccaaggaggtcaagaccggagcttttggtgagcttatgactcct
gccgagaaggccaaactctacaccgccattggctacagtgaggtagctgtcaatcataac
ctgccaaagaactttgaggacattaagatacattttcacatgaagaggatgtctttctca
atgaaagacaacaaggatcagaatgaaatcctcaaggtcacagttgaagacctgaaaacc
atgctgacccagaggcccggagcacaagccattaagctgtcggcacagcttagtctgttt
gaggtgaaaggactggcaaataatcggccggcacccacgctgctgtcgtcgaggaaggct
gccacggtaacagggacccccctgcttgacatcctgtttgagaccaaccctctggatgag
agtgctgaccagcggctccacgtcgagtcccagcctctggagatcatctatgacgctgtg
acggtgaacagcatgtctgcgttcttcttgccgcctgatgacctccagctagacgagctg
accaacgccactctcatgaagctggaacagttccgagaccgcacctccacagggctgatg
tacgtgattgagacccagaaggttctggatctgaacgtcaacctcatggcctcctacgtg
atcgtgccccaaaccggcttctacgactccactcagaacctcatgctattggacctgggt
cacttcaaggtgtctagtctgagcagaaagaggctaccccagctctctgtagggagcagg
actatacaggacatcatgtcccaagcctacgacagcttcaacatcaagctcagcagccta
cagttcctctacagcaaaccagacggggactggaggaaagcccgtaagctgaagcaatcg
gccctccacatcctggagcctgttgatgtcaaggtggtgttcagcagagccatggtggtc
acagactcacgcatgcccaagtttaagatcttcggggagatgcctctcttgtctctgagg
atctctgatgataaggtgcgggccgtgctggagctgattaacagcatcccgctgccggag
agcaggccagccccgcgtagcaccaacacacactctacacctaaggctccaaagcagtcg
cacacccctcagctaacccccaggcaaccaaccatggctgaactgcgcaactccctcata
tgggaatcaggctcagaggaggacctgttctacgatgctcccagctctcctataggcgac
agtccgttcttccccgacaacatgcccagccccctgcaacgctccgactcggtcaagagg
agaggtctggtcaagaaagaccccaagaagaacatgacagagttcctcatgacgtttgag
atcaacaagctgtctgttcagctgtgtcgtctgtctagaggccaggaggtcacagtgtta
cacctggacgttgagcgtctcggcaccgagctaaagattcgcaccttcgacatgacatct
aacacctttctacgcgagatctgcctagagtgctcagagtatatggattcagaggagaag
aaagtgcacctgatcaccactctagacaacacaaaggaggacctcctcacattggagtac
actaaggctgataagaacgggccagaattcaagtctcagtacaagaacactgaacaatca
gtaaaggtgaacttctcatctctggatgtacacctgcacacggaggctttgctcaacgcc
atgaacttcctgaacagcctcctccccccgaccaaggaggcgttgcctagcaaggaggag
cttcccacaatcgcagaggaggacaagggagagggggaggagggagagaaggaggaatcg
gccttggcaaaaagaacatcttctaagaagtcaaagtttgaggacatggtgaatttgcac
atcagagccgatctcaactgtctgaaggttttcatccgaggccatagccacatgatagca
gagatctgcattgagggcctggtgtcggaggtgctgatgaggagaaaggcggtggaggtt
ctggccaacctgaagaacatagtcatcctggactgtgataaggaggcactgtacaagcag
tgtgtgtccatagctgataaggaggtgtttgctttccgcatggtgaaccacacggacgcc
actgagggcgatgcctatctagacatgggtaaagtggacaccagcatcaccctgacggtg
ggctgcatccaggtcatctttctcaacaagtttgtctcctccatcctggctttcatcaac
aatttccaggcggccaaggaggccctggctgaggtgacggtgcaggcagcggaaaaggca
gccacaggtgtgatggagctggctgagcgcagtgtgcgcatctctctggatgtagacttc
aaagctcctcttgtcttcctgccgcagtcgtcctcctccaccaacgtcactgtggctgac
ctcggtatggtcacggtcaagaactgcttcgccttggtcgactcccagacgcatgtcaag
atccctcccatcatcgacacgatgaccgtggtcctcagtgacctgaagatgtacagaacc
acctttgagaaggggagatttcagggggagatccaggttctgaagccggtcaacctggac
ctgtccatccagaggaacctgtcagcctcctggtaccacagcatccctgacataaagatc
actgcccacctcaaacctatgaatctgatcctgagtcaggatgacatgacggtggtgttg
aggactctgggtgagaacatgtcagagacgtcagacgctgcttcccctcgtcctcctccg
tctacagtggatcactccgacactgccactagcaaaggctcggagggcacaggaggtact
ggtactatctccaccagcggcaacatagtggtaactgctgcagtggtcgagacccagaag
agcactaagctgaagaacatactcaaagtagacttcaagtttgactccatgactctggtc
ctgtacagccccaatgggactgaggtgcaggtgttggactccagggatgatcagctgatg
ctggctgagttcaccttgggaactatctctacatctgtccacatgttctcagacggatcc
atgaaggcctccgtcaaactcacagactgcctgctagacgacaagagatgcagagtcaag
aatatcactgccaggatgatggcgattcgcccgagcgctgagaagaacgtgatggtggag
ttgaactacaatcaggggcgtgaaggcacctctctggagacggtggtgcaggatgtctac
ctctgtgccagcatggagttcctgctcaccgtggccgacatcttcctcaaggccagccaa
caaggtttctcctcagccgcccccaagaacagcagcactaaacccacagttacagccacc
accgctttcaaggaacctgctccagtggcagtcaagtcggagatgaatgttctggtgaag
aacccagagattgtctttgtggctgacctgacgtgtgccgacgccccagccctggtcatg
accatggagtgcgagctggtgatgaagagcaacccggatggtcagctgatgacggcagtg
gtcaaggacctgaaggtagtggcctgccccttcctgagggagaagaggaggaacaaggag
accactgtgctgcaaccctgccaggtgttcttcaagagcacacagtcctccacctccccg
caggccatggaggtctccatcaaggcactgacactcaaggtgtcacccatcatcatcaac
acagtgatcaccatccagtcggtgctgagcccggccggtgcagacatgccccagtcggag
ctggagagccccgtgcccccagacctgtgggagcgccggtcctggcgggatctcaagctg
tggttcctggaggaggagggtaaagacgaggatgcccagtccctggtccggctgattccc
cagggtgagtccctgcaggtggccatttcctccatctgcctgaccctggaggcaggggtg
ggccaccgtaccgtccccatgctgctggccaagtcctccttccacggggacgtcaagaac
tggagcaccctcatcaacctgcacagccagctcaacctggaggttcactacttcaacgag
gtgatgggggtgtgggagcctctgctggagcccctagaggacgagatcagagacggcttc
agatcctggactctgggattaaagatgaagaagaagccagtaaagtactcaggtatatca
gatgaagtagattacagcatcccagactacaagactatcatcagcatcagcagcaaggac
cagctcaacatcaccctctccaagtgtggactgggcatgctcagtaacctgggcacggcc
tttgcggaggcggccaagcagacatcagagagtttccaggaggacgaggcgccgttcgtg
gtgaagaaccgtctgggactgactgtgtcagtggtgtacagtgagatgttctgccccctg
ggccgtgtggccacagagaaccgtgtagagctgcagaacggagagagtgtcaacatggac
taccgtcgcaccaccacccactcagaccagttctctgccatgacctcgctggtggccaag
gactactacatacagcccactccgtcgggccacacttcagccagcatgattccgttgatc
aaagtggggcgtggtatgtacagtgtcatgcacaaagtctctggggtcacccgcttcctg
gtctgtcagatctactctgtgcagggaagcaagcacatcaagatccgctctcccttccag
atcataaaccacttttccatcccgttcagagtgatggagggctccatgtgtctggggatg
tcattacctacagaggagttctgcgtgcctctcgactcctacaggtcaaagttgagcctg
cagccggtaaccgaaggagacaatcaatatgattcttccgagggcttcagctatgagtca
gtgagccagcagcctggcacacgtgtgcagcagacctgtcatcgacatggcaacagcgcc
agcgtgctaatggtcaacatcgtacctctgaaagacacagtgacatcacaacacacggga
gtggccggggagcactttgatgagccctacatcctgcacctgtggccctccgtcctgctc
cggaaccttctaccctaccccatcacctatcgcctacaggatagtgaagagcccaccccc
atcacattgatggacggccactcagcagagcttcacaccgccgtcatggacctgtcaagc
ctggaactccgcctcctcaactacctggggcaggattggaaggcccactatggtctccat
ggcgaccaggacgagatcaccttcatcgtgttctgctccctgcacgatgaagatgaggag
gttaggttaggggagggtggagaaaggaagcgggcagagctggacattgcggtgcatgtg
aagtacgatgcgggcctgactgaggtggccatccattctccctactggatggtgaacaag
acgggtcgcctgctacaatacaaggccgacgacatccaccgcaaacacgccatggactat
gacatgcccctgctcttctccttcaagccacgcaactttctgcacaacaacaaggtgcgg
ctgatgatctcggacagcgagctgtctgatgatttctccctggataccgtgggtagctat
ggtgaagtgaagtgcaaagggaggctcaaagattacctgatcggggtgaagatcgacccc
agcagtttcagcctgacccgtatcgtgagctttgtgccatactacctgttggtgaacagg
accaagcatgtgatctgggtgggagaggagggccaggaccactggaccaaggccaaccca
caccaggcagccatcccattctggcccgagaaggactccaagaagctcaaaatcaaggta
gaaggctgtcagtcaacccctcaaaccatggacttcaccaaaccagaaaactgcctgttg
ctgcacctggacaacactctgggcggagtcattgtggacgtgaacctatcagaccactcg
atcattatccgtttttcggactaccacgatggagccgcccccttcctcatcatcaaccac
accctggagcagacgctggagttctaccagagattgcggagagactcgtcaaaatgcttg
gcagacgagctgctcgaactctccttctcactagaggagacccagcacagcagtcagaag
gagaaggacaagctgagcccggggaaggcggtgtactatacctgggctgagcccaccggg
tcacgctccctggcctggcagtgtggtagctacagtggcgagctgaagagtgaagaggac
ctgcggttggacgtgaatgaggagggtaagctgtacctcatctcattctacgagggcctc
cagcgggtggcgctgttcaccgaggacaggcggatctacaagctgctgtgtgagagtgag
aaggccgagctggctgaacaggaaatcatcctctccctgcaagacgtgggtgtctccctg
gtcaacaacagcaaccaccaggaggtgtccttcattggcattaccagttcagacgtgatg
tgggagttcaagccaaagaagaagtctcgctggaaacccctgagttttaaatatgcagcg
ctgctggagacccacttcagagagtacaccgagagtggatcagtggacaactccatctta
gacctggagagcaacttccaggtgtctctgacgccaaataggcaagacatgaggatgatg
aagccatgtgatgctccaatcaggaggaacttccttccgggggtgaaggtggagtacagc
gtatcggcccgccagagtgcctaccgtgtccagatcaaccgcatacagatccagaatcag
ctgcctggagcaatctttccctatgtcttctacccaataaaactaccaaagtctgtcacc
atggactcagaacccaaacctctgacagacatcagcattgttaccagggcagccggacac
tcagatatctcccgcatcaagtatttcatggtgctgatccaggagatggacttgaagttg
gacctgggtttcctctacgccatcttggatctgttcaccccggagaatgccagcgtaatg
acatcagagcagatggtggagttgtttgagaaggacattaagtatctgaagactgagctg
aacaacatctcagccgctgacacgtcccctatcagtctctatgagtacttccacatctct
cccatcaagttgcacctgagtttgtctttgagttctggaggagaggatggtaataaggag
aagagggagactgaggtcatccctgtccaatccctcaatctgctgctgaaaagcatcgga
gcaaccctcactgacgtgcaggacatcgtcttcaaattggcctatttcgagctgacattc
cagtttcgcactcgccagcaactacaatgggaggtcatcagacactattcgaagcaggcg
ataaagcaaatgtatgtgctggtattgggcttggatgtgctgggaaacccctttgggctg
atccgaggtctgtctgagggagtggaggctttcttctatgagccctatcagggagctatc
cagggaccagaggagtttgtggagggtatggcactgggggtgaaggcactggttggagga
gcagtggggggcattgctggcgctgcctccaggataacaggcgccatggcgaagggtgtg
gctgccatgacgatggatgaggaataccagcagaagagacgagaggctatgaacaagcag
cccagtggcctgagagagggcctgactcgtggaggcaaaggactggtctctggcttcgtc
agtgggatcacagggatcgtcaccatgcccattagaggtgctcagaaggagggtgcggca
ggcttctttaagggtgtcgggaaggggctggtgggggctgtggccagacccacaggaggt
atcatcgacatggccagcagcactttccagggcatcaagagggcagctgagacgtcccag
gatgtggagagtctgcgtccgcctcgcttcattcacgaggacggggtcatccgaccatat
aaggagagagaaggcgttggcagccagatgctacagaaaattgagaatggacagttcgcc
aagtacagatactttgctcacgccaaagtaaacgagtcagatttcttgatgatcaccaaa
agtggaatctttttcgtgaccaaaggcacatttgggcagcttacctgtgagtggcagtat
ctgtttgacgagttcaccaagaagcccatgatcgtggaggggaggaggcttcggatagag
gcaaaggagagagtaaagtctgtgtttcatgccaaagagtttgggaagattataaacttc
aaaagtccagaaatagccgagtgggttcttaccaagctggaggacgccagggagagtcta
cacaagtactga
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integrated database retrieval system
