Oncorhynchus masou masou (cherry salmon): 135528183
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Entry
135528183 CDS
T10723
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135528183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135528183
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135528183
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135528183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
zf-RING_10
zf-UBR
U-box
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
135528183
NCBI-ProteinID:
XP_064813155
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All DBs
Position
33:complement(28331421..28333660)
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AA seq
541 aa
AA seq
DB search
MPLSKPKELLEHELSCPICLQLYTDPVYLPCGHNYCLACIQKATDVSGGEKSLPQCPECR
EEYGGTETLQRNFKLCGIIEGYRAVAPADHLKREPLKVRCDHCLDLETLAIKTCLKCEVS
LCARHLQYHTERESFRTHDLVEPQTELGQRDCAIHGRLLEYFCASDMTSLCANCFIEGTH
QNHDVLTFEAAEEEMRRALEIQSKAVANRLQLTETLLKRAAEDQGTSEAVGDKLLSKSVD
LMDSMAGLVSRYKDRMSLLLEKERGLQRESWQSGLGLLEEQQQQLIEVHQRTTEVLTETE
KCLFINRFLLIEPQLREVVTSTVARVPNKVPLNPKRLQASLRMEDFRAEMARLLQSLHVL
INPLELTFNPSTAHTSLLLSKDLQTVKYSGTKQAYADNPERFSTAPQVLCSQGFTSGEHI
WVVEVGDQSMWSVGLCYKSVPRRGDHSRLGHNPSSWRLQWKNKKLTACHASSNVALEELA
NQPLRVEVALDYERGTLIFHSTKDHRKHLHTFRAVFREAVYPAFSILSTREQSWITLQSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtctaaaccaaaggagctgttagaacatgagctcagctgccctatctgcctg
cagctctacacggatcccgtgtatctgccctgtggccataactactgcctggcctgcatt
cagaaggctacagatgtcagcggtggagagaagagcctgcctcaatgccctgagtgcaga
gaagagtacggcggtacagagacactgcaaaggaacttcaagctctgcggcatcatagaa
ggctacagggccgttgcgccagcagaccacctgaagagagagccgctgaaggtgcgctgt
gaccactgcctggacttagagacactggccatcaagacctgcctaaagtgtgaggtgtcc
ctgtgtgccaggcacctgcagtaccacactgagagggagtccttcaggacccatgacttg
gtggagccccagactgagctgggccagagagattgtgccatccacggacgcctgctggag
tacttctgcgccagcgacatgacctctctctgcgccaactgtttcattgagggcacccac
cagaatcatgatgtcctgacgttcgaggcagccgaggaggaaatgaggcgggccctggag
attcagagcaaggcggtggccaacaggctgcagctgaccgagaccctgctaaagagggct
gctgaggaccagggcacctctgaggctgtgggagacaagctgctgtccaagtctgtggat
ttgatggacagcatggctggcctggtgagcaggtacaaggacaggatgagcctgctgctg
gaaaaggagagaggccttcagagggagagctggcagagtggcctggggcttctagaagaa
cagcagcagcagctgatagaggtccaccagcgcaccactgaggtcctcacagagacagag
aagtgtctgttcatcaataggttcctgctaattgagccccagctcagggaggtcgtgacg
agtaccgtggccagagtgcccaacaaggtccctctgaaccccaagcggctccaggccagc
ctgaggatggaggacttcagggcagagatggctcggctcctccagtctctccacgtcctg
ataaaccctctggagctgacctttaaccccagcacagcccacaccagcctgctgctctcc
aaagacctgcagacagtcaaatacagtggtaccaagcaggcgtatgctgataacccagag
aggttcagtaccgcaccccaggtcctgtgctcccagggcttcaccagtggggagcacatc
tgggtggtggaggtgggcgaccagagcatgtggtcagtgggcttgtgctacaagagcgtg
cccaggaggggtgaccacagccggctggggcataacccgtcctcttggcgtttgcagtgg
aagaacaagaagctgacggcgtgccatgcctcctcaaacgtggcgctggaggagctggcc
aatcagccactgagggtggaggtggctctggactatgagcggggaacactgatcttccac
agcaccaaggaccaccggaaacatctgcacacgttcagggctgtgttcagagaggctgtg
taccctgcgttcagcatcctctccaccagagaacagtcctggatcacgctacagagtgga
gtgtaa
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