Oncorhynchus masou masou (cherry salmon): 135529146
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Entry
135529146 CDS
T10723
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135529146
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135529146
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
135529146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
135529146
NCBI-ProteinID:
XP_064814094
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGRDYSKASHDEMVEVIRRDPIVVQVVRRHGNPTHS
HQTLQEVHVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTMEHEFYE
CPEYLSNTPAEVDRPEEFEYEQVELCRLNSQEKLGLTLCYRTDDEEDTAIYVSHVGPNSI
AARDGRIREGDRILQINGCDVQDRQEAFTLLSNEESRSIVLLVTRPEEAWLDEEHNELLE
ELKMEILEERRNEEVQKTGGGEEQAKQLEEDDVMTDTATCSSNTQDKDSGLGTGRNEESS
EQEVLLARVHRRPAQGLRDRWRAKHGQGLGRRVVVPSDTQGPRGLIQAQEGEGGVGLGLE
CDSRFKQLLELKCQIRNSGECGVYYSRRSTIECSLTEQSRVGVSGGGGMEQELRMLNDEL
RSIELECQSIMQAHQLRKNQRDPPCTPMCSPGRSPKHGREQHAKLADINEHPGERQWDSD
KLRGDKDSSSAYNTAESARSTPLGMERSPDHSLQRRISLTNQKNLRSTMAASGQSISIPI
PDRELLSETSTRTTTHSRQDPNPSPGTTVISSSPDQSNPSPSESDPALPADDERCDRTRS
HRGPRRVPPYPSPYHTAPQQGASPAHARHLQSYMQQLLQQTSSLETYSQSQLSLLSVCRD
RSTRPGEPRLEWKVKVRADGTKYVARRPARDRILRERALRIREERSGGMTTDDDTMSEMK
MGRYWSKEERKQQLARAREQRRRREYMQRSRLECLREGPGSGAEGRKEVNILELSHKKMM
KKRNKKILDNWMTIQELMSHGARAPEDQGTKQVHNAFLSVTTV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgctctttacagaaacgggaggaacactacaagctgctgtatgag
atttcacaggtgaatggcagggactactccaaggccagccatgacgagatggtggaggtc
atcagaagagaccccatcgtggtgcaggttgtccgtcgccatggcaaccccacccactca
caccaaacattacaggaagttcacgtggtggacgtgtgcacgcagacggacatcactttt
gaacacatcatggccctggctaagctgaggcctgctactccacctgtacctgacatctgc
ccctttctgctttcagacagctgtcactccatccacaccatggagcatgaattctacgag
tgtccagagtacctctccaacaccccagctgaagtggacaggccagaggagtttgagtat
gagcaggtagagctctgtcggctcaacagtcaggagaagttgggtctgacgctgtgctat
cggactgacgatgaagaggatacagctatctacgtcagccacgttggacccaacagcatc
gctgccagggacgggcgcattagggaaggagatcgaatattacagatcaatggctgtgac
gtacaggacaggcaggaagctttcactctcctgtccaatgaggagtccaggagtatcgtt
ctcctggtgaccagaccagaggaggcgtggctggatgaggagcacaatgaactcctagag
gagttgaagatggagatccttgaggagaggaggaacgaggaggtgcagaagacaggagga
ggagaggagcaggccaagcagctggaggaggatgacgtcatgacagacacggccacgtgt
tcctccaatactcaggacaaagacagcggcttggggacggggcgcaacgaggagagctcc
gaacaggaagtcctcctggcccgtgtccaccggaggcctgcccagggcctgagagaccga
tggagggccaagcatggccaggggctgggcaggagggtggtggtaccctcggacacccag
ggacccaggggtctgatccaagcccaggagggtgagggtggagtggggttaggactggag
tgtgacagccgcttcaagcagctcctggagctcaagtgccagatccgtaacagcggggag
tgtggtgtgtactatagcaggagaagcaccatcgagtgtagcctgacggagcagagcagg
gtgggggtcagtggtggtggagggatggaacaggagctgaggatgttgaacgatgagctg
aggagtatcgagctggagtgtcagagcatcatgcaggcccaccagctccgcaagaaccaa
agggatcccccctgcacccctatgtgctccccaggacgaagtcccaaacatgggcgtgag
cagcatgccaagctggccgatatcaacgagcatccaggggagaggcagtgggacagcgac
aagctaaggggggacaaggacagctccagtgcctataacacggctgagagcgccaggtcc
actcctctaggcatggagagatccccggaccactctctacagagacgcatcagcctcacc
aaccagaagaacctccggagcaccatggcagcctccggccagtccatctccatccccatc
ccagacagagagctcctgagtgagacctcgaccaggaccaccacacacagccgacaggat
cccaaccccagccctggaaccacggtcatctccagcagccccgaccagtccaacccttcc
ccctctgagtcagacccggccctgcctgcagacgacgagcgctgcgaccgcaccaggagc
caccgggggccacgcagggtccctccctacccgtccccttaccacacagccccccagcag
ggcgcctctccagcccacgccagacaccttcagagctacatgcagcagctcctccagcag
acctccagtctggagacctactcccagtcccagctcagtctcctcagcgtctgccgggac
cgctccacccgcccgggggaaccacgccttgaatggaaggtcaaagttcgagccgacggg
acgaagtatgtagctcggcgaccggcgagggaccggattctacgagaacgggcgctgagg
atcagggaggagcgtagtggagggatgaccacggacgacgacactatgtccgagatgaag
atggggcggtactggagtaaagaggagagaaagcagcagctggccagggccagggagcag
aggaggaggagggagtacatgcagaggagccggctggagtgtctcagagagggccctggg
agcggggccgagggccgtaaagaggtcaacatcctggaactcagccacaagaagatgatg
aagaaacgcaacaagaagatcctggataactggatgaccatccaggaactaatgagtcac
ggggccagagcacctgaggaccaggggactaaacaagtacacaatgccttcctgtctgtt
actacagtatag
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integrated database retrieval system
