Oncorhynchus masou masou (cherry salmon): 135529183
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Entry
135529183 CDS
T10723
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135529183
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135529183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
135529183
NCBI-ProteinID:
XP_064814114
LinkDB
All DBs
Position
Unknown
AA seq
2179 aa
AA seq
DB search
MSKIRRRVTVENSKTISDSSSSQTTTTPSRRPSVFERLGPSTGSNAVEVCTSTPASNPLT
DTTHACPEKTNCRNWLKTGNCSYGNTCRYTHGTQPRGKGFSGSFSRSAERPTGDLRERMK
NKRQDVESDATKRDPEEPTSPTARQRDSSRGRHREKEDIKITKERSPASEEETTEWEANR
EDSDNGDYDYELSLEMKRQKIQRELMKLEQENVEKREEIVIKKEEPTTKTRTTIISKTSP
ERSSSKGSPSSRKSSGSPKHTKGPKASGSRKKEKKTSVSSSASATARSSKGGHGKKKGPR
TPSPPPPVLPLVNPVVAAGGKKHKGKHKNKEKCEEKPPKEGKERGRDVEKHKEKKEKRRD
RSDSSHKAKRSVMSEERSGSVSSPSRDREASPSARKNKSTSPKVASQKTLAPASPPHRSP
PPRHKRTPTPPRHHSPSSHSGSSAQRHSPSPRRRRSASPAYNREPPAASSPPGQRCSSRS
PAASRDTSSPQRRTSPGGRNHSRGRERGRSERGRSPPAQEHRHERRDESRGKREKDGTRD
DRDYEVTETSSSRDAAREDRETKEGRERRGDGRSDRRGDSTSTSRDPTRDRDRDTKDSTR
EPRTTETTSTRSGRDPLEYRDREREREREKEKERERERGEREKTDRKEEAVPEEGRGYGR
GHGREEGGRTEGRGETRTESRAERPGRGRGREADASDKGSTRNARGSQLESGGHDGWESR
SGGGFREKSAERSTDRGAERGGAERGGVDRGGAERDRYDGDRRGGEQATGRDSSYDRRGG
HTDRGDRRENRERDQRASSPGRHPARGEEPDREETRGRDERRGEEKGGDRREDRARERER
EREREREKEREREKEKEREAERERVREREREREREREKEREREKEKEREKEREREREREE
REREREERDRERKEREREREREREREREQRERERQREWEEREKGRDERRERTRDEPRDDR
SVRDSHEDRKTSRKRHRVETTPSPTRPSPKRARDATPGDGEEYNSPEEKSERLIGGGQPK
VRPTSGSGPITILPVTVPVCPPPPVLDSVERHRLLSQVVLPPQDPLLRSPPSTSVAEDTK
PSRWKDEERRGGGDKREGRSRRNEEADARGDRGGAGRGGERRGEHPSDSSTPVSASGSDS
RRGKERDGREPTPPPPPVALVTEDRDAPVPSGHEEGKKKTKSQKKGLKKGRKEEAVAGGV
SGAPERFTNPEPPSSMALSDGPPPPLLSPRKAPKKKALDKKRKRSRGAESDASEEEPGSS
HLPPGKRNKRGPRTPPPAPKEALLSQRAMPHSVAEPLPQPVKMDANFSDWSDEDVLERGG
VSAPVKAPPTVPTERTPTEALPRRGGPRGGKERLERPVPLPIAPLLSQDPPMLLQTLPPQ
PLMSQPLLRKPPPEQKRSSSMGSNQSRASSRRLRSPSNESAHREDPQQGQGPGRPRRGHQ
LQGANSRDRERERERERERERERDRERERERGERERGPVLTEPPVVRGEERKSRIDQLRR
GEPSRSTSSDRQDSRSHSSRRSSPESERQVQSRAGSYDGREREREREREREQFERERERK
DLRQQQGPPGPLPPLQQQGQQRDWEPEGPREWGGRGREPLLMRGGNREQMRERDLRDLRG
ERERLLPEGLLQQHERERERERGGNRGIGRGGDHGNDRERERMLLMDLPPHGDPKNRMDM
RGDRPDMRGDRPDMRGDRPDLRGDMRGDMRPDMRGDIRGDMRPDMRGDIRGDMRPDMRGD
IRGDMRGDMRGDMRGDIRGDMRPDMRGDIRGDMRPDMRGDMRPDIRGDMRPDIRGDIRGD
MRPDMRGDIRGDMRPDMRGDMRPDMRGDIRGDMRGDIRGDMRPDIRGDIRGDMRPDIRGD
IRGDMRGGPDIRPDIRPDHMRPDIRGPDRAEFSLLLPHEALGHGGMDQDKAGNSHHPVGG
QIQEAEKQDSIDDEDDAKADDAVSVVSGGEEYEPISDDELDEILADSAQKREDGQEEEKT
PGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGVSKRLAGPELLERVREVC
KKELDDPKDADKLFEHDLGALNKAALSRRIERAGLLRNLGPCCKALCARRDMAIRRQLLK
NEKGLAKQMYPSVPVVDSELFQLSMRLFKKTVAAARSNQPPLGPPAGPEKADKGPPGLVP
VASPVAKPSTPQPPEMCVS
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaggcggagggtaacagtggagaattctaaaaccatatctgacagcagc
agtagccagaccaccaccaccccgtctcgacggcccagcgtgtttgaaagacttggcccc
agcactggtagtaatgctgtcgaggtgtgtacctctacacctgcatctaacccactgaca
gatacaacacatgcatgtccagagaagactaattgtagaaattggttgaagactgggaat
tgcagttacggcaatacttgtcgctacacacatggaactcagcctcgaggcaaaggattt
agtggatcttttagcaggtcagcggagagaccaactggcgatctgcgagagaggatgaag
aataagaggcaggatgttgaatcagatgctacaaagagagacccagaggagcctacgtcc
cccacagccagacagcgagactcgtcccgaggccgccacagggagaaggaagatataaaa
atcactaaagagagaagccctgccagcgaagaagagaccaccgagtgggaagccaaccgc
gaagactcggataacggcgactacgactacgaattatccctggagatgaagagacagaag
atccagcgggagctcatgaagttggagcaggagaatgtggagaaaagagaggagattgtt
atcaagaaagaggagccgaccaccaaaactaggaccactatcatatccaagacatccccg
gagcgttccagctctaaaggttccccctcctccaggaagtccagtggatctcccaaacac
actaaaggacctaaagcttccggttctaggaagaaggagaagaagacctctgtgtcgtcc
tctgcatccgccacggccagatcttccaaggggggccacgggaagaagaaaggtccccgc
acccccagcccccctcctccggtgcttccgctggtgaaccctgtcgtggcagccgggggg
aagaaacacaaggggaagcacaagaacaaggagaagtgtgaggagaagccgcccaaggag
ggaaaggagagagggagagacgtggagaaacacaaggagaagaaggagaaacgcagagac
cggtcagacagctcccacaaggccaagcggtcagtgatgtctgaggaacgttccggcagc
gtgtcctctccttccagagaccgagaggcgtccccgtcagccaggaagaacaagtccacc
tccccaaaagtagcctcccagaagacccttgcgcctgcctccccgcctcacaggtctccc
cctccccgccacaagcgcacccccaccccgccccgccaccactccccctcctcccactct
ggctcctcagcccagagacactctccttccccccgccggcgccgctcggcatcccccgcc
tacaaccgcgagcccccagccgcctcctcacctcctggccagaggtgttcctcccgctcc
cctgcagcctcccgggacacctcctctcctcagaggaggactagccccggaggacgaaac
cactctcgggggcgtgagagaggacgcagcgagagggggaggagcccacctgcccaggag
caccgacacgagcgtcgagacgagagccgcgggaagcgagagaaagacggtacccgtgac
gaccgggactacgaggtgacagagacgagctcttctcgtgatgccgcccgtgaggaccgg
gagacaaaagaggggcgagagcgccggggtgacgggcgcagcgaccgacgaggagactcc
accagtacctccagggaccccaccagggatagagaccgggacaccaaggactcgacccgg
gaacccagaaccacagagaccacgtcaacacgctccggacgagaccctctggagtacagg
gaccgagaacgggagagggagcgagaaaaggagaaagagagggagcgggagagaggagag
agggagaagacggacaggaaggaggaggctgtcccggaggaggggaggggctatgggagg
ggccacgggcgagaggaaggagggaggactgaagggaggggggagacgaggacagagagt
agagctgagagacctggcaggggtaggggccgcgaggctgacgcatctgacaaaggctcc
acccggaatgcccgaggctcccagctggagagcggtggtcatgacggttgggagtcacgt
agcggcggaggcttccgtgagaagagtgcggagaggagcaccgaccgtggggcggagaga
ggaggcgcagagagaggaggtgtcgacagaggaggagcggagcgtgaccgttatgacgga
gacaggagaggaggggagcaggcgactgggagagactcatcctacgaccgtagaggtggt
cacaccgaccgtggtgaccgcagagagaacagggagagagaccaaagagcttcctctcct
ggtcggcacccagccagaggagaagagccagacagggaggagaccagagggagggatgaa
cgcagaggagaggaaaaaggaggagacaggcgagaggacagggcccgagagagggagcga
gagagggaacgggaaagagagaaggagagagaaagagagaaggagaaggagagggaggca
gagcgggagagggtccgggagagggagcgagaacgggagcgagagagagaaaaggaaagg
gagagggaaaaggagaaagagagggaaaaggagcgagagagggaacgggagagggaagag
agggagcgggagagggaggagcgagatagggagaggaaggagagagagcgggagagggaa
cgagagcgggagagggagcgagagcaaagagagagggagaggcagcgggaatgggaggag
cgtgagaaaggaagggatgagcgacgggaacggacgagggatgaaccaagggacgaccgc
tctgtccgagactcgcatgaagaccgcaagaccagccggaagaggcacagggtagagacc
acacccagcccgactcgcccctctcccaagcgagcaagggacgccaccccaggagacggc
gaggaatacaacagccctgaggagaaaagtgagcgtttgattggtggaggtcagcccaag
gtccgccccacctctggctctggcccaatcaccatcctccccgtcacagtaccagtgtgt
cctcctcctccagtgcttgacagtgttgagagacaccggctgttgagtcaggtggtactc
ccgccccaggaccccctcctgcgttccccacccagcacctctgtagccgaggacaccaag
cccagccgctggaaggacgaggagcgccgtggaggcggggacaagagggaggggaggagc
cgccggaacgaggaggccgacgcccgcggagacagaggaggagccggcagaggaggggag
agacggggggagcacccctcagatagcagtacccctgtctcggcctccggctcggactct
aggaggggtaaagagcgggacggtcgggagcccacccctcccccgcctcccgtggccctg
gtcactgaggacagagatgctccagtcccgtcaggtcatgaggagggcaagaagaagact
aagtcccagaagaaaggcctgaagaaggggaggaaggaggaggctgtggcaggaggtgtt
tcaggagctccagagaggttcaccaacccagagcccccctcctccatggccctctcggac
ggccccccgccccctctcctctccccccgcaaagcgcctaagaagaaggcgctggacaag
aagaggaaacgatcccgtggcgctgagtcggacgcgtctgaggaggaaccaggctcctcc
catcttcccccgggcaagaggaacaagaggggtccccggacgcccccacccgcgccaaag
gaggctctgctatcccagagggccatgccacattccgttgcagagcccttgccacaaccc
gtcaaaatggacgccaacttcagcgactggtctgacgaggatgtgctggagcgcggtggt
gtatcggcgcccgttaaggcaccccccacagtccccactgagaggactccgaccgaagct
cttcccaggagaggaggtccgagggggggcaaggagaggttggagaggcctgttcccctg
cccatcgcccctctgctgtcccaggaccctcccatgctactccagaccctgcctccccag
cccctcatgtcccagcccctgctgaggaagcctcctccggagcagaagaggagcagcagt
atgggaagcaaccagagcagggcctcatccagacgtctccgctctccctccaacgagtca
gcccacagagaggaccctcagcagggccaaggaccaggccgacccaggagaggacaccag
ctccagggggccaactcccgagaccgggaacgagaaagggagcgagaaagggaacgagaa
agggagcgagacagggaaagagagagggagcgtggtgagagagagagggggccagtgctc
acagagcctccagtggtgaggggagaggagcggaagtcacgcatcgaccagctgaggaga
ggagagcccagtcgcagcacctcctcagaccggcaggactctcgcagccacagctccaga
cgtagctctcctgagtcagagcgtcaggtgcagtcgcgggccgggtcctacgatggccga
gagcgtgagagggagagagagagggagcgggaacagtttgagagggagcgtgagcgcaag
gacctccgacagcaacaggggcctccggggccactacctcctctccagcagcaggggcag
cagagagactgggagcccgaggggccacgggagtggggtgggaggggccgtgaacccctc
ctcatgcgtggaggcaacagagagcaaatgagagagcgtgatctccgtgacctgcggggt
gagagagagcggcttctgcccgagggtctcctgcagcagcacgaacgagagcgggaaagg
gagcgtggtggcaacaggggcattggccgcggtggcgaccatggcaacgaccgggagcgg
gagaggatgctgctgatggacctgccgccacatggggaccccaagaacaggatggacatg
aggggagacagaccagatatgaggggagacagaccagatatgaggggagacagaccagat
ttaagaggggacatgcgaggagatatgagacctgatatgaggggagacattcgaggggac
atgagacctgatatgaggggagacattcgaggggacatgagacctgatatgaggggagac
attcgaggggacatgagaggagatatgagaggagacatgagaggagacattcgaggagat
atgagacctgatatgaggggagacattcgaggggacatgagacctgatatgaggggagac
atgagacctgatattaggggagacatgagacccgatattaggggagacattcgaggggat
atgagacccgatatgaggggagacattcgaggggacatgagacctgatatgaggggagac
atgagacctgatatgaggggagacattcgaggggacatgaggggagacattcgaggggac
atgagacctgatattaggggagacattcgaggggacatgagacctgatattaggggagac
attcgaggggacatgagaggggggccagatatcagaccggacataaggccagatcacatg
agaccagatatcagggggccggacagggctgagttctctctcctgctcccccacgaagcc
ttgggacacggcggcatggaccaggacaaagcaggcaacagccatcaccctgtgggagga
cagatacaggaagcagagaaacaggacagcattgacgacgaagatgacgcgaaggcggat
gacgctgtgtcggtggtgtctggcggggaggagtacgagccaatcagtgatgacgagttg
gatgagatcttggcggacagcgcccagaagagagaggatgggcaggaagaagagaagacg
ccaggtcccctggatgtgattgatgtggactggtccagcctgatgcccaagcagaagcag
gagccccgggcggcaggggcagctctgctccggttcaccccaggggcagtgctcctcagg
gcgggcgtctccaagcggctagctgggcccgagctcctggagagagtcagggaggtctgc
aaaaaggagctggacgaccctaaagatgctgacaagctgtttgagcacgacctgggtgct
ctgaacaaggcagctctgagcaggaggatagagagggcaggtctgctgaggaacctgggc
ccctgctgtaaggccctctgtgcccgcagggacatggccatcagacggcagctcctcaag
aacgaaaagggcctggccaagcagatgtaccccagtgttcctgtggtggacagtgagctc
ttccaactcagcatgcgtctcttcaagaagactgtagccgccgccagaagcaaccagccc
ccgttggggcccccagcaggcccagagaaggccgacaaggggccaccggggctggtaccg
gtagcttcaccggtagccaagcccagtacaccacagccccccgagatgtgtgtctcctga
DBGET
integrated database retrieval system
