Oncorhynchus masou masou (cherry salmon): 135529244
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Entry
135529244 CDS
T10723
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
omm03083
Polycomb repressive complex
omm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135529244
03083 Polycomb repressive complex
135529244
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
135529244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135529244
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
135529244
Histone modification proteins
HAT complexes
HATB complex
135529244
HDAC complexes
Sin3A-HDAC complex
135529244
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
135529244
PRC2.2
135529244
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
135529244
Heterochromatin formation proteins
Other heterochromatin formation proteins
135529244
Chromatin remodeling factors
NuRD complex
135529244
NuRF complex
135529244
NuRF complex (fruit fly)
135529244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
eIF2A
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135529244
NCBI-ProteinID:
XP_064814160
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEGQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatac
aaaatctggaagaagaatactcctttcctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactat
gcagtccacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtacaggtccccaacgatgacgcccagtttgatgcttcccactacgacagtgaa
aaaggagcagaatttggaggttttggatcagtgagtggaaagatagagattgagatcaag
ataaaccacgaaggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacgcccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcgaggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccat
acgatctgcctgtgggacatcggtgctggtcctaaggaggggaagatagtggatgctaag
acgatcttcaccggtcacactgcagtggtggaggacgtgtcctggcacctgctccacgaa
tcactgtttggctctgtggccgatgaccagaaactgatgatctgggacacacgctccaac
aacacgtctaagcccagccatgccgtggacgcccacactgcagaggtcaactgtctatcc
ttcaacccctacagcgagttcatcctggccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaactgaagctccactcgtttgaatcgcacaaggatgaaatc
ttccagcaggtgcaatggtcccctcacaacgaaaccattctggcttccagcggaacagat
aggaggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgca
gaggacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgat
ttcacatggaaccccaacgagccatgggtcatctgctccgtctccgaggataacatcatg
caggtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttca
gagctggagggtcaagggtcgtaa
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integrated database retrieval system
