Oncorhynchus masou masou (cherry salmon): 135529403
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Entry
135529403 CDS
T10723
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135529403
03036 Chromosome and associated proteins [BR:
omm03036
]
135529403
Enzymes [BR:
omm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
135529403
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135529403
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135529403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
135529403
NCBI-ProteinID:
XP_064814240
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MSSILINALLSSCHDPDTLFNTLCWPTDSWPDTERVEALTTFIAGIGKLPQSGTSDDGDK
VAFSIAKRDIFLRKVESIIWTQCLPLLLKVSNGDGACKGKRVPDGRAEITIAVCRLLSVC
INTLCDTAVSGRVARAVLPSFQLPDGETEEELPGQGEGRLGIDVAIEAMSVILPALSSNE
ELITSILSSALSCIKTLPDALVSKITVRLIFTLLNCYSEDGIASKLRFILEDLCSWHKSD
SSKTDSPVVTERALLCLTTLSDYLFSPAKLQQHTLPQSLSYTRPDPRRSLQFWRILQDGL
THKDNVSRKRALYLLKRCVALSEDEAVEFPSSSVSSEDNEEIIFRWAPDRCKLLRELWED
YALVMETLEENQIHVVRPVLNRIHTLIQTAANDSQGVSLFHPSWLLGVYQRMFHSENKSV
MREGVDHLLGLQVLRRPTFALAFSQFILGPFMDVMSESSLFHRTAGQSVGECPELGVKLQ
VFMVTFFSSLPQESRGPVLLQLVQRLGSQHWCAVPILFLSRALSHLPPCPLLGPDGLQAL
REVLRCTMITHQVLLRGAAQCFLLNSALSLTDVTLVTLDDVFSLLVHFRPDESLRRGTPL
WNQLCDWLADSEGSFRPCVRESADGTSTSTSPERETVRGYVQHQMELFLRVPASTDQTDS
VPDPGEVELLAKAILLCVDIEGRTQRSEGEETTGFSGGMDSLLRPLLDTLSRLHTNVYLP
LRKTDKSLQLLLRLLQLTPARHTSAAVEKEQEDSVTVSMETLVLGVVEPIQEFILRRLSG
ELQELCDVERAELYLSVLKEVVLMYSVLEWNHSKVQEACFPRLLRYVLRTLEADQIPSVA
GQVSRAVAMASLAMTCEVAALGVFNLQSETTILLVHLSSYFYSPAPPPAPPLSLVNFNQT
LLKPPTAAQSTGVSEQGPLLKDWGRMAAHFIRDQWTCLGYGRRIGPPGPLELPRASGSLQ
AAIEALSLLPSGLVLPVLDFMASMLPQVALSDETLCVEAVTVSWKLVLGLSSNPHDFWPT
LQGFVTMAFHHSLLELTEEQAPRLTVTLQQIAVELMELSQAKTGVFNVLIQHCCHTWLPS
DPGSEGQSQSDAMFSSSLLHLDILAEACVYGPVFRRDQRLIQEVQVYVERLGEECAANTA
VPSDNRDDQFPRVCVMAFLSRLQPSNQLHERLMEELVLRLLKKDEAISKSKQRYYSNSLQ
HRVKNRVWQTLLMLLPKLRGEFVGTVLGRVFEAGFVSNQASVKYLIEWKMVLILVQYPEH
IDQLWACFRVDQEKTKTSVCTFLSVLVHLNIIMPQLKEKAVQWRKALDVILQWCFSHNFS
VRLYALLALKRVWGLEGARAEAEEGADGLGGLATVVKACLHQAEAMQSTGNASKNWTRIQ
DHFFFGVFHPVRDYSVETIFYTFPSLSEVFEDEWIPPWKFEKLVDFSQSASLPLRNPVPD
LSQIQPGDWIQQDKGDQDGEERWAEVQKKMTPWRLGIQEQEPELGLMPQQRAARLGKLHS
ALLVVASLIDKPTNLGGLCRTCEIFGASALVLDSLRHVSDKHFQALSVSSELWLPLLEVK
PVELADFLQLKKREGYCIVGVEQTANSQSLKDYKFPEKTLLLLGNEREGIPANLLQLLDV
CVEIPQQGVIRSLNVHVSAALLVWEYTRQYLPSTGVKSD
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctattttaatcaatgcccttttatcaagttgccatgatccggatactttgttt
aacacgttgtgctggccaactgactcgtggccggacacagaaagagtagaggcactgaca
acgtttattgctggaattggtaaactaccccagtctggcacatctgacgatggcgacaaa
gttgccttttcaattgcaaaaagagacatctttctacgaaaagttgaatcgatcatttgg
acacaatgtttaccacttctcttgaaagtctctaacggagacggggcgtgcaaaggtaaa
cgtgtgccagatggaagggctgaaatcaccatcgccgtgtgcaggcttctttctgtctgc
atcaacacactgtgtgacacggcagtttcggggcgagtcgcccgcgctgtcctgccatcc
ttccagctgccagacggggagacagaggaagagcttcccggccagggtgagggacggctg
ggtatcgacgtggctatcgaagccatgtcagtcatcctacccgctctctcatccaacgaa
gaattgatcacgtcgatcctctcatctgccctgtcctgtatcaagacgttaccggatgct
ctggtctccaaaatcaccgttcggcttattttcactctcctcaactgctacagcgaggat
gggatagcgagtaaactccggttcattttagaggatttgtgtagctggcacaagagtgac
agctcaaagacggactcacctgtggtgacagaacgcgccttgctgtgtttaacaactctc
tcggattatctcttctctccagctaaactacagcaacacacccttcctcaaagtctgagc
tatactcgacctgaccctcgtcgttctctgcagttctggaggattctacaagatggactg
acgcacaaagacaacgtgtcccggaagcgggcgttgtacctgctgaaaaggtgtgtcgct
ctgtcagaggatgaggcggttgagtttccaagcagttcagtgtcaagtgaagataatgaa
gagatcatattcagatgggccccagacagatgcaagctgctcagagagctctgggaggac
tatgccttggttatggagacactggaggagaaccagattcacgtggtccgccctgtgctc
aacagaatccacacgttgatccaaacagcagccaatgatagtcaaggcgtcagtctgttc
cacccgtcatggctgctgggagtgtaccagcgtatgttccacagtgagaacaagtccgtc
atgagagagggagtggatcacctactgggactccaggtgctccgacgccctaccttcgcc
ctggccttctcacagttcattctgggtcctttcatggatgtgatgtctgaaagctccctc
tttcacaggactgcaggacagagtgtaggggagtgtcctgagctgggagtcaagctgcag
gtcttcatggtcacgttcttcagcagcctgccacaggagagcagaggtcctgtgttgctg
cagcttgtccagcggctaggttctcaacactggtgtgctgtccccatcctcttcctctct
cgggccctgtcccaccttcctccctgccctctcctgggccccgacggcctgcaagctctc
agggaggtgctccgctgcactatgatcacccaccaggtgctactgagaggagctgcccag
tgtttcctgctgaacagtgccctctccctgacagatgtgaccttagtgacattggatgat
gtgtttagtttgctggtgcatttcagaccagacgagtctctacgtagaggaacaccgctc
tggaatcagctgtgtgactggctggctgacagtgaaggcagcttcaggccctgtgtcaga
gaatcagctgatggtaccagtaccagtacctctccagagagagagactgtgagaggctac
gtccaacaccagatggagctcttcctcagagtcccggctagcacagaccagacagacagt
gtcccagacccaggagaggtggagctgctagccaaggccatcctactgtgtgttgacata
gaggggaggactcagaggtctgaaggagaggagactactggtttcagcggtgggatggac
tcgctcttacgccccctactggacacactgagcaggctccacactaatgtctacctgccg
ctacgcaagactgacaagagcctgcagctgctgctacgactactgcagctcacaccagcc
agacacacctctgctgcagtagagaaagaacaagaagacagtgtgacggtctccatggaa
acgctggttctgggcgtggtggagcccattcaggagtttatcctccgaagactgagtgga
gaactacaggagctatgtgatgtagagcgtgctgagctctacctgtcagtgctgaaggag
gtggtgctgatgtacagtgtgttagagtggaaccactccaaggtacaggaggcctgtttc
cccagactcctcagatacgtcctgaggaccctagaagctgaccagatcccctctgtggcg
ggtcaggtgtccagggcggttgccatggcgtcgttggccatgacctgtgaggttgcagcg
ttgggagtgttcaacctccaatcagaaaccacgatcctactggtccatctgtctagctac
ttctactcccctgctccacccccagcccctcctctctctctggtcaacttcaaccagacc
ctgctgaaacctccaactgcagctcagtcaacaggtgtttcagagcagggtcctctcctc
aaggactggggccgtatggcagctcatttcatccgggaccagtggacgtgcctgggatac
gggaggagaataggcccacctgggcccctggagctccccagggcgtcagggtccctccag
gctgctatagaggctctgtctctgctccccagtggcctggtactgcctgtactggacttc
atggcctccatgttgccacaggtggcgctgtctgacgagaccctgtgtgtagaggctgtg
actgtctcctggaagctggtgctgggactgagcagtaaccctcatgacttctggcccacc
ctgcagggctttgtgaccatggcctttcaccacagcctgctggagttaacagaggagcag
gcacctaggctcactgttacactacaacagatagccgttgagttgatggaactctcccag
gccaagaccggtgtattcaacgttctgatccaacactgctgccacacctggctgccctct
gacccaggaagtgaaggccagagccaatcagatgccatgttttccagttccctactgcac
cttgacatcctggctgaggcatgtgtgtatggacctgtgttcaggagggaccaaaggctg
atccaggaggttcaggtctatgtggagaggcttggagaggagtgtgctgctaacactgca
gtccccagtgataaccgggatgaccagttcccacgtgtgtgtgtcatggcgttcctcagc
cgcctccagccctccaatcagctgcatgagagactgatggaagaactggttctccgcttg
ctgaaaaaggatgaggccatatcgaagtcaaaacagcgttactatagcaactccctgcag
catcgtgtcaagaacagggtgtggcagacactactgatgctgctgcccaaactgagaggg
gagtttgtaggtaccgttctgggtcgtgtgtttgaggcaggtttcgtcagtaaccaggcc
tcagtcaagtacctgatagagtggaagatggttctaatcctagtccagtaccctgaacac
atagaccaactctgggcctgcttcagggtggatcaagagaagaccaagaccagtgtctgt
accttcctgtctgtgttggtccacctcaacatcatcatgcctcaactcaaggagaaggca
gtacagtggcgtaaggccctggatgttattctccagtggtgtttcagtcataacttcagt
gttcgtctgtacgccctgctggccctgaagagggtgtggggtctggagggggcgagggcc
gaggccgaggagggggcggatgggctcggggggctggccaccgtcgttaaggcctgtctg
caccaggctgaggccatgcagagtactggaaatgccagtaagaactggaccaggattcag
gaccacttcttctttggtgtctttcatcctgttcgagactatagtgtggaaaccatattc
tacacattccccagcctatcagaggtgtttgaggacgagtggattccgccctggaagttt
gagaagttggtggacttctcccagagtgcatctctcccattgaggaaccctgtccctgac
ctgagccagattcagcctggagactggatccagcaggataaaggggatcaggatggtgag
gagcgctgggccgaggtccagaagaagatgaccccctggaggttggggatccaggaacag
gagccagagctgggtctaatgccccagcagagagcagcacgcctgggaaagctgcacagt
gccctcctggtggttgcctcgctcatagacaagcccaccaacctgggaggtctgtgtagg
acgtgtgagatctttggggccagtgctctggtgttggacagtcttcgccacgtcagtgat
aaacacttccaggccctgagtgtctcctctgagctatggctccccctactggaggtgaag
cccgtagaactagctgacttcttgcagctgaagaagagggagggctactgcattgtggga
gtggagcagacagccaatagtcagagtctaaaggactacaagttccctgagaagactctg
ttactgctgggtaatgagcgtgagggtatcccagctaacctgctccagctgctggatgtg
tgtgtggagatccctcagcaaggtgtcatccgttccctcaacgtacacgtgagcgccgcc
ctgctggtgtgggagtacacccgccagtacctgccctctactggagtgaagtcagactga
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integrated database retrieval system
