Oncorhynchus masou masou (cherry salmon): 135530129
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Entry
135530129 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00450
Selenocompound metabolism
omm00970
Aminoacyl-tRNA biosynthesis
omm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
135530129
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135530129
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omm01007
]
135530129
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135530129
Enzymes [BR:
omm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
135530129
Amino acid related enzymes [BR:
omm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
135530129
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
135530129
Prokaryotic type
Other AARSs
135530129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
WHEP-TRS
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
DZR_2
Motif
Other DBs
NCBI-GeneID:
135530129
NCBI-ProteinID:
XP_064814590
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All DBs
Position
5:complement(84253546..84300110)
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AA seq
782 aa
AA seq
DB search
HGQGQVQGRGTQPCNSPEGDDDCVLSEEEIQSAAVTWGKGLADLPMVPERQHPILPQEGK
RNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNVLYVCGTDEYGTATENKAR
EEGLTAQQICDKYHAVHASIYQWFQVDFDFFGRTTTRKQTEIAQNIFWRLHERGFLLEDI
VEQLRCEACQRFLADRFVEGTCPFCSYPEARGDQCDKCGKLINAVELREPTCKVCSQTPV
VQSSKHLFLDLPKLEAELEQWLERSTGSGDWTANAKQITRSWVRDGLKPRCITRDLKWGT
PVPHPDFSDKVFYVWFDAPIGYLSITANYTDQWEKWWKNPQQVELYNFMAKDNVPFHSVV
FPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYLLY
LRPEGQDSAFSWVDMATKNNSELLNNLGNFINRAGMFVSKFFEGCVPAMVLQQEDKRLLA
QVGWELKQYINLMDRVKIRDALKCILNISRHGNQYIQVNEPWKKIKGDETDRQRSGTVTG
VSVNVACLLSVMLQPYMPTVSQTIRRQLNAPPSVTGTLLQGPGTFVCXLPAGHHIGTVSP
LFQKLESEQIESLKKRFGGQQPKTTAQPDVNEPATTPASDPAAQTAVNGVDAERARELTL
AVAEQGEKVLVEVTKLLELKRLSLAEGKDPEPVLTKGKKNAQPATTPASDPGEKVRXVDA
ERARELTLAVAEQGEKVRTLKGQKAEETVIGAEVTKLLELKKRLSLAEGKDPEPVLTKGK
KK
NT seq
2351 nt
NT seq
+upstream
nt +downstream
nt
accatggtcagggacaggttcagggtagaggcacacagccatgcaacagccctgagggtg
atgatgattgtgtgctgtcagaggaagagatccagtctgccgcggtcacctggggtaaag
gacttgcagacttacccatggttccagagagacaacaccctattcttcctcaggagggca
agaggaacgtcctcgtgaccagtgccttgccttatgttaacaacgtccctcatctgggca
acatcatcggctgtgtgctcagcgctgacgtctttgccaggtacggtcgtctgcgtggtt
ggaatgtactgtatgtgtgtgggactgatgagtacggtacagctacagagaacaaggccc
gtgaggaaggtctgacagcgcagcagatctgtgacaagtaccacgctgtccacgcctcca
tctaccagtggttccaggtggacttcgacttctttggccgcaccaccacaaggaaacaga
ctgagatagcccagaacatcttctggcgtctccatgagcgaggcttcctacttgaagaca
ttgtggagcagctgcgctgcgaggcgtgccagcgttttctagccgaccgcttcgtcgagg
gaacatgtcccttctgctcttacccagaggcccgaggggaccagtgtgacaagtgtggca
agcttatcaacgctgtggagctacgggagcctacttgtaaggtgtgtagtcagactcctg
tagtccaatcctccaaacacctgttcctggacctgcccaagttggaggctgagttggagc
agtggttggagaggtctactgggtcaggggactggacggccaacgccaaacagatcacca
gatcctgggtgagggacggactcaaaccccgctgcatcaccagagacctgaagtggggaa
cccctgtacctcaccccgacttctctgacaaggtgttctacgtgtggtttgacgctccta
ttggttacctgtccatcacagccaattacactgaccaatgggagaagtggtggaagaacc
cacagcaggtggagctgtataacttcatggccaaggacaatgttccgttccacagtgtgg
tgttcccctgctctctactgggagcacaggacaactatacactggtcaaccacctggtgg
ctacagagtacctgaactacgaggacaccaagttctctaagagtcgaggtgttggtgtgt
ttggtgacatggccaaggacacgggtatcccctctgacgtgtggcgattctacctgctgt
acctccgtcccgagggtcaggactcggccttctcctgggtcgacatggccaccaagaaca
actctgagctgctcaataacctgggcaacttcatcaacagggctggtatgtttgtcagta
agttctttgagggctgtgtccctgccatggttcttcagcaggaggacaagagactgttgg
ctcaggtgggatgggagctgaagcagtacattaacctcatggacagagtcaagatccgtg
atgccctgaagtgtatcctcaacatctctcgccacggtaaccagtacatccaggtcaacg
aaccctggaagaaaattaaaggagacgaaacagacaggcagcgatcgggtacagtgacag
gtgtgtctgtgaatgtggcgtgcctgctgtccgtcatgctccagccctacatgccaacgg
tcagtcagaccatccgcaggcagctgaacgctccgccctccgtcaccgggaccctgctgc
agggcccagggaccttcgtctgtnctctgcccgccgggcatcacattggcacggtcagcc
cgttgttccagaagctagagtccgaacagattgagtctctgaagaagaggtttggaggac
agcagccaaagacgacagcccagcctgatgtcaacgagcctgccacaaccccagcttcag
atccggctgctcagactgcagtgaacggagtagacgctgagagagccagggagttaacac
tggctgtggcagaacagggggagaaggtgctagttgaggtcaccaaactactggaactga
aacggctgtccctggctgagggaaaggacccagaaccagtgctgacaaaaggcaagaaga
acgcccagcctgccacaaccccagcttcagatccgggggagaaggtgcggnnagtagacg
ctgagagagccagggagttaacactggctgtggcagaacagggcgagaaggtccggaccc
tgaagggccagaaggcagaggaaactgtgattggagcagaggtcaccaaactactggaac
tgaagaaacggctgtccctggctgagggaaaggacccagaaccagtgctgacaaaaggca
agaagaagtga
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