Oncorhynchus masou masou (cherry salmon): 135530197
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Entry
135530197 CDS
T10723
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03020
RNA polymerase
omm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135530197 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135530197 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135530197 (polr3a)
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135530197 (polr3a)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
135530197 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
135530197
NCBI-ProteinID:
XP_064814641
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFHVGYFKAIIGILQMICKTCSHIMLTKE
EKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTLCLNCSTLNGPVKKCGLLKILHEKYK
TTKKVVDTVVSDFLNSFDIAIEHNKEVEGLLNRAQENLSPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRSGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDERIKIALPHPAILKPMTLWTGKQI
FGLILKPSKACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDKGTLGSGSK
KNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKAKQDLLDGG
YAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKTNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
VYGGDGLDPAAMEGKDEPLEFNRVLDNIRSVHTCSEQPALSKNELVLTAESIMMRSDFKC
CRDSFLEEIKKFIKATSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPSQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIISAHLDVDDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKDNLPKVV
VQGIPEVSRAVIHIDEQTGKNKYKLLVEGDNLRSVMATHGVNGNRTTSNNTYEVEKTIGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPTPPRRPLLFD
SPNFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcagtttagagagactgatgtggccaaaaaaataagccacatctgtttt
gggatgaagtcggctgaacagatgagacagcaggctcatatccaagtggtcagtaagaac
ctgtacagccaggacaccagccatactcctctaccatacggagtactggatcatcgcatg
ggcaccagtgagaaggatcgtccttgtgagacgtgtgggaagaacctggctgactgtctg
ggacactatgggtatctggacctggagatgccctgttttcatgtgggctatttcaaagcc
atcattggaatcctacagatgatctgtaagacgtgttctcacatcatgctgaccaaagag
gagaaactacagtttatggatgtgttgaagaggccaggcctagcatacctccagaaacga
ggaatgaagaagaagatatccgacaaatgccgcaaaaggacattgtgtctgaattgctcc
acgttaaatggaccagtgaagaagtgtggcttgctgaagatcctccacgagaaatacaag
acaaccaagaaagtggtggacactgtagtatcagactttctcaactcattcgatattgca
atagaacacaacaaagaagtggagggcttgctaaacagggctcaggagaacctgagtcct
ctagtggtgctgaacctcttcaggaggataccagcggaggacattcccctgctcctgatg
aaccctgaggcaggtaagcctgcagacctcatcctcacccgcctgctggtacccccgctc
tgcatccgcccctctgtcatctcagacctcaagtcgggtactaatgaggatgacctcacc
atgaagctcacagagatcatcttcctcaatgacgtcatcaagaagcaccgtatgtcaggg
gccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctctac
atcaacagtgagctctctggcatccccctcaacatggcccccaagaaatggaccagaggc
ttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaagaga
gtggatttctctgggagaacggtcatctctccggaccccaacctgcggattgatgaggtg
gctgtccctgtacacgtagccaaaatcctgacctacccagagaaggtgaacaaggccaac
ttggagatgctgaggaagctggtgcggagcggtccagaggtccaccctggagccaacttc
atccagcaacgacacacgcagatgaagaggtttctgaagtacgggaaccgagagaagatg
gcccaggagctgaggtttggagacgtggtggagagacacatgatcgatggagacatcgtc
ctcttcaaccgacagccctctctacacaaactcagcatcatggctcatattgccaaagtg
aagcctcacagaacgttccggtttaacgagtgtgtgtgcacgccgtacaacgctgacttt
gacggggacgagatgaaccttcaccttccccagacagaggaggccaaggctgaagccctg
gtgctgatggggaccaaagccaacctggtgacacccaggaacggagagcctctgatcgct
gctattcaagactttctgacaggagcctacctgttgaccctgaaggacacattcttcgat
aggtctaaagcctgccagatagtggcctctatcctggtgggggtggatgagaggatcaag
atagctctcccacaccctgccatactcaagcccatgactctgtggacagggaagcagatc
tttggtctgatcctgaagcccagtaaggcctgtccagtcaaggccaacctgaggaccaag
gggaaacagtacagtgggaaaggagaggacctctgcagcaacgactccttcgtggtgatc
cagaacagtgagttgatgtgtggtaccatggataagggcacgttgggctctggctccaag
aagaacatattctacatcctgctgagagactgggggcagctggaggcagccaacgccatg
tctcgtctggcccgcatcgcccctacatacctctccaaccggggtttctccatcggtatt
ggtgacgtgaccccaggccagggtctgctgaaggccaagcaggacctgctggatggaggc
tatgccaagtgtgacgagtacatcgaggccctgaagacgggcaaactgcagcaacagcca
ggctgcacggcagaggagacgctggaggccctcatcctgaaggagctgtctgttatcaga
gaccatgccggcagcgcctgcctcagagaactggacaaaaccaacagtcctctgattatg
gctctgtgtggctccaaaggatccttcatcaacatctcccagatgatcgcctgcgtgggc
cagcaggctataagcggctctcgagtgcccgacggctttgagaaccgctcgctgccacac
tttgagaagcactctaaactccctgcggctaaagggtttgtagctgacagcttttattca
ggcctgacgccgacagagttctttttccacactatggctggtcgagagggcttggtggac
accgccgttaaaacagctgagaccggatacatgcagaggcgtctggtgaagtcgctggag
gacctgtgttcccagtatgatctgacggtacggagctccactggggacatcatccagttt
gtctacgggggggacggcctggacccggccgccatggaggggaaagatgaaccgttggag
ttcaacagagtcctggacaacatccggtctgtccatacgtgttcagagcagccagccctt
agtaagaacgagttggtcctgacagcagagtccatcatgatgaggagtgacttcaagtgc
tgccgagacagtttcctcgaggagatcaaaaagttcatcaaggctacatctgagaaaatc
aagaagaccagggacaaatatggcatcaacgacaacggcaccaccgagcccagagttctg
tatcagttggaccgcatcactcccagccagctagagaagtttctggagacctgcagggac
aagtacatgagagctcagatggagccgggctcagcagtaggagccctgtgtgcccagagc
attggggagcctggcacccagatgaccctgaaaaccttccactttgctggggtagcctcc
atgaacatcaccctgggggtcccacgcatcaaggagatcatcaacgcctccaagaacatc
agcacaccaataatcagcgctcacttggatgtggacgacgacgcagacttcggccggttg
gtgaaagggaggattgaaaagacccttctgggagagatttcagagtacattgaggaggtg
tttctgccagacgactgtttcattctggtcaagctgtcactggagaggatcagactgcta
cgactagaggtgaatgcagagacagtccgctactctatctgcatgtctaagctgagagtg
aagccgggagacatagctgtacacggggaggcagtggtctgtgtatctcccagggaaaac
agcaagagctccatgtactacgtcctccagtctctaaaggataacctgcccaaggtggtg
gtacagggtatccctgaggtctccagagctgtcattcacatcgacgagcagaccggcaag
aacaagtacaagctgctggttgagggagacaacctacgcagtgtcatggcaacccacggt
gtcaacggcaacaggaccacctcaaacaacacctatgaggttgagaagacgattggtatc
gaggctgctaggtccaccatcatcaacgagatccagtacaccatggtgaaccacggcatg
agcatcgacaggcgacacgtcatgctcctggctgacctcatgtcctataagggtgagatc
ctgggtatcacccggtttggcctggctaagatgaaggagagcgtgttgatgctggcgtcc
ttcgagaaaactgccgaccatctctttgacgctgcgtactttggtcagaaggactcggtc
tgtggtgtatctgaatgcatcatcatgggaatccccatgaacatcggtacaggactgttc
aagctcttacacaaggctgataaggaccccacgccacccaggagacccctgctcttcgac
agtcccaacttccacatccccttggttacatag
DBGET
integrated database retrieval system
